Pairwise Alignments

Query, 341 a.a., Aldose 1-epimerase (EC 5.1.3.3) (from data) from Shewanella amazonensis SB2B

Subject, 379 a.a., aldose 1-epimerase precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  197 bits (500), Expect = 5e-55
 Identities = 116/322 (36%), Positives = 180/322 (55%), Gaps = 16/322 (4%)

Query: 32  VLSLGGIIRSLWAPDSRGERANLVLGCDSLEDYLAQNAHLGAIAGRYANRIALGKLHYDG 91
           + + GG I S+  PD  G+  ++VLG DS+ DY+   +  GA  GRYANRI  G+   DG
Sbjct: 60  ITNFGGRIVSIMVPDKNGKMQDVVLGFDSIADYINVPSDFGASIGRYANRINQGRFVLDG 119

Query: 92  EDFQLDINQATNCLHGGHEGFNRKQWALGLL-PDGVRLSLSSPDGDMGFPGNCSVQLDYR 150
           +  QL  N   +CLHGG +G+  + +   L+ P  + L+L SPDGD  FPGN + ++ Y+
Sbjct: 120 DTIQLPQNNFGHCLHGGPKGWQYQVYEANLIDPTTLELTLISPDGDANFPGNVTAKVTYQ 179

Query: 151 LAGNN-LYVEIMAMTDRPCPVNLTQHSYFNL--DGRADCLDHTVTMHARAFLRCNEAGIP 207
           L  +N + ++  A TD+   +N+T HSYFNL  D      D+ + ++A  +   +   + 
Sbjct: 180 LTDDNAIDIKYSATTDKKTIINMTNHSYFNLAGDPSKTSTDNIMYVNADYYTPVDSTFMT 239

Query: 208 TGR-ATTAGTPLAL-------QDVRLGDRVQHPDLASTRGFDHCFIIDKTQDELALAAEL 259
           TG  A    TP+         +D+   D VQ   L +  G+DH ++++   D   +AA L
Sbjct: 240 TGEIAPVKDTPMDFTTPKAVGKDINNYDFVQ---LKNGNGYDHNWVLNTKGDISQVAARL 296

Query: 260 HSPHSGRLLKLYTNQPGVQLYGANFLDGE-RGRQGKIYRPYQGVCLEPQLFPDAPNQPDL 318
            SP +G  L++YTN+PG+Q+Y  NFLDG   G++G +Y     VCLE Q +PD+PN+ D 
Sbjct: 297 TSPETGITLEVYTNEPGIQVYTGNFLDGTVSGKKGIVYNQRASVCLETQHYPDSPNKADW 356

Query: 319 GKAWLMPGEIYHHISRYQFEVK 340
               L PG+ Y+    ++F  +
Sbjct: 357 PSVVLEPGQTYNSECIFKFSTE 378