Pairwise Alignments

Query, 942 a.a., excinuclease ABC, A subunit (RefSeq) from Shewanella amazonensis SB2B

Subject, 951 a.a., excinuclease ABC subunit UvrA from Rahnella sp. WP5

 Score = 1533 bits (3968), Expect = 0.0
 Identities = 747/942 (79%), Positives = 847/942 (89%)

Query: 1   MDKIEIRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           MDKIE+RGARTHNLKNINL IPRDKLIV+TGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
Sbjct: 1   MDKIEVRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60

Query: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLFARVGEPRC 120
           ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITE++DYLRLLFARVGEPRC
Sbjct: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120

Query: 121 PTHGQPLAAQTVSQMVDKVLERPEGEKLMLLAPVVKARKGEHVKLLDSLSAQGYIRARID 180
           P H  PL+AQTVSQMVD VL +PEG++LMLLA ++K RKGEH K L++L++QGYIRARID
Sbjct: 121 PDHNIPLSAQTVSQMVDNVLAQPEGQRLMLLATIIKDRKGEHTKTLENLASQGYIRARID 180

Query: 181 GEVCDLSDPPTLDLHVKHTIEVVVDRFKVKDDMQQRLAESFETTLELSGGIAVVASMEEG 240
           GEVCDLSDPP L+L  KHTIEVVVDRFKV+DD+ QRLAESFET LELSGG AVVA M++ 
Sbjct: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLAQRLAESFETALELSGGTAVVADMDDP 240

Query: 241 AAEEMIFSANFACPHCGYSMAELEPRIFSFNNPAGACQTCDGLGVQQFFDPERVIVSGEL 300
            AEEM+FSANFACP CGYSM ELEPR+FSFNNPAGAC TCDGLGVQQFFDP+RV+ + EL
Sbjct: 241 KAEEMLFSANFACPVCGYSMRELEPRMFSFNNPAGACPTCDGLGVQQFFDPDRVVQNPEL 300

Query: 301 SLAGGAVRGWDRRNFYYFQMLKSLAEHYEFDVEAPFSELTAKVQKIVLYGSGKEEVAFRY 360
           SLAGGA+RGWDRRNFYYFQML+SL EHY+FDVEAPF+EL++ VQ  +L+GSGK  + F+Y
Sbjct: 301 SLAGGAIRGWDRRNFYYFQMLRSLGEHYDFDVEAPFNELSSDVQNAILHGSGKTTIEFKY 360

Query: 361 VNDRGDVVVRKHPFEGILNNMDRRYRETESNTVREELAKYISNQACSSCGGSRLREEARH 420
           +NDRGD  +R+HPFEG+L+NM+RRY+ETES+ VREEL+KYISN+ C+SC G+RLREEAR+
Sbjct: 361 INDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELSKYISNRPCTSCRGTRLREEARN 420

Query: 421 VFIEDLNLPTLTHWSIGEAMDYFNKLEFEGQKAQIAEKILKEVRDRLGFLVNVGLNYLSL 480
           VF+E+  LP ++ +SIG AMD+F  ++  GQ+A+IAEK+LKE+ DRL FLVNVGLNYLSL
Sbjct: 421 VFVEETTLPEISDFSIGHAMDFFRNMKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLSL 480

Query: 481 ARSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLTHLRDLGNT 540
           +RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL TL HLRDLGNT
Sbjct: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLIHLRDLGNT 540

Query: 541 VIVVEHDEDAIRMADHIIDIGPGAGVHGGEVICDGDLAAITACEHSVTGQYISGKRKIQV 600
           VIVVEHDEDAIR ADHIIDIGPGAGVHGGEV+ +G    I A E+S+TGQ++SGKR+I V
Sbjct: 541 VIVVEHDEDAIRAADHIIDIGPGAGVHGGEVVAEGTAEDIMATENSLTGQFLSGKREISV 600

Query: 601 DGGRTPINPEQLIELRGARGNNLKNVDLSIPVGLFTCVTGVSGSGKSTLINDTFFKIAHK 660
              R P +  ++++L GA+GNNLK+V L++PVGLFTC+TGVSGSGKSTLINDT F +A +
Sbjct: 601 PAQRVPADATKVLKLSGAKGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPLAQR 660

Query: 661 ALNGATVDEPAPYTSITGLEQCDKVVDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQE 720
            LNGAT+ E APY  I GL   DKV+DIDQSPIGRTPRSNPATYTGIFTP+RELFAG  E
Sbjct: 661 ELNGATIAEAAPYREIEGLGHFDKVIDIDQSPIGRTPRSNPATYTGIFTPVRELFAGVPE 720

Query: 721 SRTRGYQVGRFSFNVKGGRCEACQGDGLIKVEMHFLPDVYVPCDSCKGKRYNRETLEVKY 780
           SR+RGY  GRFSFNVKGGRCEACQGDG+IKVEMHFLPD+YVPCD CKGKRYNRETLE+KY
Sbjct: 721 SRSRGYTPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780

Query: 781 KGKNIHEVLQMTVEDARTFFDAVPAIARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKL 840
           KGK+IHEVL+MT+E+AR FFDAVPA+ARKLQTL+DVGL+YI LGQSATTLSGGEAQRVKL
Sbjct: 781 KGKSIHEVLEMTIEEARDFFDAVPALARKLQTLIDVGLTYISLGQSATTLSGGEAQRVKL 840

Query: 841 AKELSKRDTGKTLYILDEPTTGLHFADIQLLLDVLHRLKSHGNTIVVIEHNLDVIKTADW 900
           A+ELSKR TG+TLYILDEPTTGLHFADIQ LL+VLH+L+  GNTIVVIEHNLDVIKTADW
Sbjct: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLEVLHQLRDQGNTIVVIEHNLDVIKTADW 900

Query: 901 IVDLGPEGGSGGGTILVAGTPEDVAEHPTSHTARFLKPLLQR 942
           IVDLGPEGG+GGG ILVAGTPE VAE   SHTARFLKPLL+R
Sbjct: 901 IVDLGPEGGAGGGQILVAGTPETVAECKESHTARFLKPLLER 942