Pairwise Alignments

Query, 942 a.a., excinuclease ABC, A subunit (RefSeq) from Shewanella amazonensis SB2B

Subject, 950 a.a., excinuclease ABC, A subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1726 bits (4469), Expect = 0.0
 Identities = 852/942 (90%), Positives = 894/942 (94%)

Query: 1   MDKIEIRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           MDKIEIRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
Sbjct: 1   MDKIEIRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60

Query: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLFARVGEPRC 120
           ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITE+YDYLRLLFARVGEPRC
Sbjct: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGEPRC 120

Query: 121 PTHGQPLAAQTVSQMVDKVLERPEGEKLMLLAPVVKARKGEHVKLLDSLSAQGYIRARID 180
           PTHGQPLAAQTVSQMVDKVLE PE  +LMLLAPVV  RKGEHVKLL+ LSAQGYIRARID
Sbjct: 121 PTHGQPLAAQTVSQMVDKVLEMPEDSRLMLLAPVVNGRKGEHVKLLEGLSAQGYIRARID 180

Query: 181 GEVCDLSDPPTLDLHVKHTIEVVVDRFKVKDDMQQRLAESFETTLELSGGIAVVASMEEG 240
           GEVCDL+DPPTLDLHVKHTIEVVVDRFKV+ D+QQRLAESFET LELSGGIAVVASM+EG
Sbjct: 181 GEVCDLTDPPTLDLHVKHTIEVVVDRFKVRSDIQQRLAESFETALELSGGIAVVASMDEG 240

Query: 241 AAEEMIFSANFACPHCGYSMAELEPRIFSFNNPAGACQTCDGLGVQQFFDPERVIVSGEL 300
             EE+IFSANFACPHCGYSMAELEPRIFSFNNPAGAC TCDGLGVQQFFDP+RVI + EL
Sbjct: 241 TTEELIFSANFACPHCGYSMAELEPRIFSFNNPAGACPTCDGLGVQQFFDPDRVITNPEL 300

Query: 301 SLAGGAVRGWDRRNFYYFQMLKSLAEHYEFDVEAPFSELTAKVQKIVLYGSGKEEVAFRY 360
           SLAGGA+RGWDRRNFYYFQML SLA+HY+FDVEAPF +L+ KV+KIVLYGSGK+ +AF+Y
Sbjct: 301 SLAGGAIRGWDRRNFYYFQMLSSLADHYKFDVEAPFEQLSDKVRKIVLYGSGKDSIAFKY 360

Query: 361 VNDRGDVVVRKHPFEGILNNMDRRYRETESNTVREELAKYISNQACSSCGGSRLREEARH 420
           +NDRGDVVVR HPFEGILNNMDRRYRETESN VR+ELAK+I+ QAC SCGGSRLREEARH
Sbjct: 361 INDRGDVVVRNHPFEGILNNMDRRYRETESNAVRDELAKFINTQACQSCGGSRLREEARH 420

Query: 421 VFIEDLNLPTLTHWSIGEAMDYFNKLEFEGQKAQIAEKILKEVRDRLGFLVNVGLNYLSL 480
           VFI DLNLP LT WSIGEA+DYF+KLEF GQKAQIAEKILKEVRDRLGFLVNVGLNYLSL
Sbjct: 421 VFIGDLNLPKLTVWSIGEALDYFDKLEFTGQKAQIAEKILKEVRDRLGFLVNVGLNYLSL 480

Query: 481 ARSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLTHLRDLGNT 540
           +RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL TL HLRDLGNT
Sbjct: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLIHLRDLGNT 540

Query: 541 VIVVEHDEDAIRMADHIIDIGPGAGVHGGEVICDGDLAAITACEHSVTGQYISGKRKIQV 600
           VIVVEHDEDAIRMADHIIDIGPGAGVHGGEVICDG +  I AC+ SVTGQYISGKR I +
Sbjct: 541 VIVVEHDEDAIRMADHIIDIGPGAGVHGGEVICDGPIEKIIACDESVTGQYISGKRNIHI 600

Query: 601 DGGRTPINPEQLIELRGARGNNLKNVDLSIPVGLFTCVTGVSGSGKSTLINDTFFKIAHK 660
              RTP +P+Q+IEL GARGNNL+NVDL+IP+GLFTCVTGVSGSGKSTLINDTFFKIAHK
Sbjct: 601 STPRTPFDPKQVIELYGARGNNLRNVDLTIPIGLFTCVTGVSGSGKSTLINDTFFKIAHK 660

Query: 661 ALNGATVDEPAPYTSITGLEQCDKVVDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQE 720
            LNGATVDEPAPY  I G+EQCDKVVDIDQSPIGRTPRSNPATYTGIFTPIRE+FAGTQE
Sbjct: 661 MLNGATVDEPAPYDRIVGMEQCDKVVDIDQSPIGRTPRSNPATYTGIFTPIREIFAGTQE 720

Query: 721 SRTRGYQVGRFSFNVKGGRCEACQGDGLIKVEMHFLPDVYVPCDSCKGKRYNRETLEVKY 780
           SRTRGYQVGRFSFNVKGGRCEACQGDGLIKVEMHFLPDVYVPCD+CKGKRYNRETLEV+Y
Sbjct: 721 SRTRGYQVGRFSFNVKGGRCEACQGDGLIKVEMHFLPDVYVPCDACKGKRYNRETLEVRY 780

Query: 781 KGKNIHEVLQMTVEDARTFFDAVPAIARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKL 840
           KGKNIHEVLQMTVEDAR FFDAVPAIARKLQTLMDVGLSY+RLGQSATTLSGGEAQRVKL
Sbjct: 781 KGKNIHEVLQMTVEDAREFFDAVPAIARKLQTLMDVGLSYVRLGQSATTLSGGEAQRVKL 840

Query: 841 AKELSKRDTGKTLYILDEPTTGLHFADIQLLLDVLHRLKSHGNTIVVIEHNLDVIKTADW 900
           AKELSKRDTGKTLYILDEPTTGLHFADIQLLLDVLHRLKSHGNTIVVIEHNLDVIKTADW
Sbjct: 841 AKELSKRDTGKTLYILDEPTTGLHFADIQLLLDVLHRLKSHGNTIVVIEHNLDVIKTADW 900

Query: 901 IVDLGPEGGSGGGTILVAGTPEDVAEHPTSHTARFLKPLLQR 942
           I+DLGPEGG GGGTIL  GTPEDVA HPTSHTARFLKPLL+R
Sbjct: 901 IIDLGPEGGGGGGTILATGTPEDVALHPTSHTARFLKPLLER 942