Pairwise Alignments

Query, 375 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 387 a.a., ABC-type multidrug transport system, permease component from Acidovorax sp. GW101-3H11

 Score =  108 bits (270), Expect = 2e-28
 Identities = 84/323 (26%), Positives = 142/323 (43%), Gaps = 6/323 (1%)

Query: 19  LALVSYLPILAMLALWWLFSAALPRQLPVAMVDLDNSSLSRELGRHIAASPVISP-ISFA 77
           L L+   P+L      W ++  +  ++PVA+VD+D +SLSR++ R   A P I   +   
Sbjct: 32  LLLLIGAPVLYGFFYPWFYADEVLTRVPVAVVDMDRTSLSRQITRFADADPRIEVRLVTG 91

Query: 78  SLPQAEDAMNRAEVYALVVVPHGFSRDLKTGAQPTVDVRYNGQFLLVGKLLAANLQQAIA 137
           S  +A+ A+ R E+    V+P    R++  G    V +  NG + L+ K +     +A+ 
Sbjct: 92  SEHEAQQALWRGEIEGYAVIPPHLKRNVVRGENAVVSIEANGAYALLNKAVQFGFAEAVG 151

Query: 138 DAMKPLAYSKQLAHGANPHQAHINIAPIATQTTALFNRNNNYVGFLVPPVLIALWQLTAM 197
                +   K  A G +  QA  + AP+  QT ALFN    Y  F+VP V + + Q T +
Sbjct: 152 TVSAGVEIRKLQASGQSALQARASRAPVQLQTVALFNPIEGYGSFVVPAVALLILQQTLL 211

Query: 198 LVFANALNRELEPSA-RCDSVGLLPRLGAKLLCYMPLLMLQGLFIHALLFGYLKLPVAAS 256
           +  A      +E    R  +   L R    LL    L    GLF    +F     P   +
Sbjct: 212 MGAALLAGTWVEAGQHRASATTWLGR----LLALSTLGWASGLFYFGWIFVLHDYPRGGN 267

Query: 257 PLWLIPAMLALLLAVFLIVAVIFLLMQESARVVSFCTALFAPAFAFMGVTFPVQDMPAAA 316
           PL  +  +   + A+  + +++ L      R +        P     G ++PV+ +P   
Sbjct: 268 PLGALALLACYVPAIAALGSLLGLWFGNRERALQVLLFTTLPIAFVAGFSWPVEALPEPL 327

Query: 317 QYWRLLMPSSHYIDSHIALVSYG 339
           Q+ R L+PS+  + + + L   G
Sbjct: 328 QWLRWLLPSTSGVQASLRLNQLG 350