Pairwise Alignments

Query, 375 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 387 a.a., ABC transporter permease from Rahnella sp. WP5

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 74/330 (22%), Positives = 146/330 (44%), Gaps = 19/330 (5%)

Query: 2   KTLLRRELGALWQNPWQLALVSYLPILAMLALWWLFSAALPRQLPVAMVDLDNSSLSREL 61
           KT  +   G L +  W + L+S    L +++L  +++      LPVA++D D+S+ SR L
Sbjct: 12  KTFGKVLTGLLDKPMWMMLLLS----LCVMSL--VYANRTVWDLPVAVIDQDHSTASRML 65

Query: 62  GRHIAASPVISPISFASLPQAEDAMNRAEVYALVVVPHGFSRDLKTGAQPTVDVRYNGQF 121
            R + A   I+ +++ +L +AE  +   +++A++++P    + +  G    + V  +   
Sbjct: 66  ARQLDAGSKIATVAYDNLAEAEHDLALRKLFAVIIMPVDLEKKILAGQNIVIPVYGDATN 125

Query: 122 LLVGKLLAANLQQAIADAMKPLAYSKQLAHGANPHQAHINIAPIATQTTALFNRNNNYVG 181
            L    +  ++  A    +        L++G +  QA + ++PI  Q+  +FN   ++  
Sbjct: 126 RLANGQIQQDVLAAYQSILTQYNTDLLLSNGFSERQASVVLSPILGQSLDVFNPGISFAA 185

Query: 182 FLVPPVLIALWQLTAMLVFAN-ALNRELEPSARCDSVGLLPRLGAKLLCYMPLLMLQGLF 240
            + P +L+ L Q + ++     ++     P+ +      L  + A        L+   LF
Sbjct: 186 IIFPGLLVMLLQHSLLIASVRVSIVLNSGPAGKPSIPAFLGGISA--------LIPVWLF 237

Query: 241 IHALLFGYLKLPVAASPLWLIPAMLALLLAVFLIVAVIFLLMQESARVVS--FCTALF-- 296
           +  +LF      +       IP +L L     L V  +  L+ E  R V   + T  F  
Sbjct: 238 LSIVLFVLWPWVLGYRQTATIPEILLLTFPFLLAVLGLGKLVTECLRSVELIYLTLAFLT 297

Query: 297 APAFAFMGVTFPVQDMPAAAQYWRLLMPSS 326
            P F   G  +P+Q MPA  +    ++PS+
Sbjct: 298 TPVFYISGTIWPLQAMPAWVRAISSMLPST 327