Pairwise Alignments

Query, 375 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 381 a.a., ABC-type multidrug transport system, permease component from Marinobacter adhaerens HP15

 Score = 76.3 bits (186), Expect = 1e-18
 Identities = 75/340 (22%), Positives = 146/340 (42%), Gaps = 19/340 (5%)

Query: 1   MKTLLRRELGALWQNPWQLALVSYLPILAMLALWWLFSAALPRQLPVAMVDLDNSSLSRE 60
           ++ +  +EL  L ++     ++  +P+L +L   +  +  + R +PV +VD   S LSRE
Sbjct: 7   IRAIFGKELIQLRRDRMTFGMIVMIPLLQLLLFGYAINTNI-RHIPVGIVDFSQSGLSRE 65

Query: 61  LGRHIAASPVISPIS-FASLPQAEDAMNRAEVYALVVVPHGFS------RDLKTGAQPTV 113
           + + + A+ V+   S F S+ +A+ A+  AEV A++++P          + L  G+ P  
Sbjct: 66  IVQIVKATQVVEIRSYFESVEKAQAAIASAEVRAVLIIPEDVDNRLARHQSLGFGSPPAT 125

Query: 114 DVRYNGQFLLVGKLLAANLQQAIADAMKPLAYSKQLAHGANPHQAHINIAPIATQTTALF 173
           D   +     + + +A      IA A+K L           P    +N      + T L+
Sbjct: 126 DEETSQP---IAQWIADGSDTIIASAIKSLRGMPLAELLDRP----VNRVTPTFEVTLLY 178

Query: 174 NRNNNYVGFLVPPVLIALWQLTAMLVFANALNRELEPSAR----CDSVGLLPRLGAKLLC 229
           N     V  +VP ++  +  +T ++  + A+ RE E           V  +  +  K++ 
Sbjct: 179 NPEQRTVVNIVPGLVAIILTMTMIMFTSAAIVRERERGNMEMLISTPVRPIELMIGKIIP 238

Query: 230 YMPLLMLQGLFIHALLFGYLKLPVAASPLWLIPAMLALLLAVFLIVAVIFLLMQESARVV 289
           Y+ + ++Q   I  L      +PV      L       + A   +  VI  + +   + +
Sbjct: 239 YIFIGVIQVSIILGLGRVLFHVPVEGGLAQLAGVTFLFITASLTLGLVISTIARNQLQSM 298

Query: 290 SFCTALFAPAFAFMGVTFPVQDMPAAAQYWRLLMPSSHYI 329
                +  P+    G  FP + MP AAQY    +P++H++
Sbjct: 299 QMTVFVLMPSILLSGFVFPYEGMPVAAQYIAEALPATHFM 338