Pairwise Alignments

Query, 375 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 393 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  112 bits (279), Expect = 2e-29
 Identities = 97/377 (25%), Positives = 166/377 (44%), Gaps = 12/377 (3%)

Query: 4   LLRRELGALWQNPWQLALVSYLPILAMLALWWLFSAALPRQLPVAMVDLDNSSLSRELGR 63
           +++RE   L   P  L  +   P+   L    L  + LP+ LP  +VD+D+SS SR + R
Sbjct: 14  VMQRECRRLVSRPLYLFCMVIAPLFCYLFFTTLMDSGLPQNLPAGVVDMDDSSTSRNIVR 73

Query: 64  HIAASPVISPIS-FASLPQAEDAMNRAEVYALVVVPHGFSRDLKTGAQPTVDVRYNGQFL 122
           ++ A      ++ ++++  A  A+   ++Y    +P G S + ++  QP +    N  +L
Sbjct: 74  NLDAFSQTGVVAHYSNVTDARIAVQEGKIYGFFYIPKGLSAEAQSQRQPKISFYTNYSYL 133

Query: 123 LVGKLLAANLQQAIADAMKPLAYSKQLAHGANPHQAHINIAPIATQTTALFNRNNNYVGF 182
           + G LL  +++          A S   A GA   QA   + PI   T  L N   NY  +
Sbjct: 134 IAGSLLFRDMKMMGELTAGSAARSVLYAKGATEDQAMGFLQPIVIDTHPLNNPWLNYSVY 193

Query: 183 ----LVPPVLIAL-WQLTAMLVFANALNRELEPSARCDSVGLLPRLGAKLLCYMPLLMLQ 237
               L+P VL+ L + +T   +     +R      R  +  +   L  KLL +  +  + 
Sbjct: 194 LCNTLIPGVLMLLIFMVTVYSIGVEIKDRTAREWLRMSNNSIYIALAGKLLPHTVVFFIM 253

Query: 238 GLFIHALLFGYLKLPVAASPLWLIPAMLALLLAVFLIVAVIFLLMQESARVVSFCTALFA 297
           G+F +  L+G+L  P  +    +I A L L+LA      V+   +      +SF +    
Sbjct: 254 GIFYNVYLYGFLHFPCNSGIFPMIFATLCLVLASQCCGIVMIGTLPTLRLGLSFASLWGV 313

Query: 298 PAFAFMGVTFPVQDMPAAAQYWRLLMPSSHYIDSHIALVSYGVSGMELLGKSFTFMPFLL 357
            +F+  G +FPV  M    Q    L P  HY    +  V   ++G  +      +M  L+
Sbjct: 314 ISFSISGFSFPVMAMNPVLQALSNLFPLRHYF---LIYVDQALNGYSMAYSWSNYMALLI 370

Query: 358 -LLLPIALLARKGLKEA 373
            ++LP  ++ R  LKEA
Sbjct: 371 FMMLPFFVVHR--LKEA 385