Pairwise Alignments

Query, 375 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 419 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 80.5 bits (197), Expect = 8e-20
 Identities = 81/354 (22%), Positives = 152/354 (42%), Gaps = 22/354 (6%)

Query: 6   RRELGALWQNPWQLALVSYLPILAMLALWWLFSAALPRQLPVAMVDLDNSSLSRELGRHI 65
           +RE    +++   L     +P+   L   +++   + R++P  +VD  +SSLSRE  R +
Sbjct: 22  KREFQTTFRDQGVLIFFILVPLGYPLLYSFIYDNEVVREVPAVVVDDSHSSLSREYLRKV 81

Query: 66  AASPVISPISF-ASLPQAEDAMNRAEVYALVVVPHGFSRDLKTGAQPTVDVRYNGQFLLV 124
            A+P I  +++ A + +A+  +     Y ++ +P  FS ++  G Q  V +  +   LL 
Sbjct: 82  DATPDIQIVAYCADMEEAKQMLKNRLAYGIIYIPSDFSDNIAKGKQTQVSIYCDMSGLLY 141

Query: 125 GK-LLAANLQQAIADAMKPLAYSKQLAHGANPHQAHINIAPIATQTTALFNRNNNYVGFL 183
            K +L AN   ++ D  K +  ++  +      Q  I   PI  +  ++FN    +  FL
Sbjct: 142 YKSMLIANTAVSL-DMNKDIKIAR--SGNTTERQDEITGYPIEYEEISIFNPTAGFAAFL 198

Query: 184 VPPVLIALWQLTAMLVFANALNRELEPSARCDSV-------GLLPRLGAKLLCYMPLLML 236
           +P VL+ + Q T +L    A     E +   D V       G L  +  K L Y  + +L
Sbjct: 199 IPAVLVLIIQQTLLLGIGLAAGTARENNRFKDLVPINRHYNGTLRIVLGKGLSYFLVYVL 258

Query: 237 QGLFIHALLFGYLKLPVAASPLWLIPAMLALLLAVFLIVAVIFLLMQESA-RVVSFCTAL 295
              ++  ++     L          P  L L +A +L   + F +    A R    C  +
Sbjct: 259 VSFYVLHIVPRLFSLNQIGQ-----PGSLVLFVAPYLAACIFFAMTTSIAIRNRETCMLI 313

Query: 296 F----APAFAFMGVTFPVQDMPAAAQYWRLLMPSSHYIDSHIALVSYGVSGMEL 345
           F     P     G+++P   +P   +Y   + PS+  I+  + + + G +  E+
Sbjct: 314 FVFTSVPLLFISGISWPGAAIPPFWKYVSYIFPSTFGINGFVKINNMGATLSEV 367