Pairwise Alignments

Query, 517 a.a., outer membrane efflux protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 446 a.a., transporter from Pedobacter sp. GW460-11-11-14-LB5

 Score = 54.3 bits (129), Expect = 9e-12
 Identities = 69/333 (20%), Positives = 137/333 (41%), Gaps = 31/333 (9%)

Query: 193 GIHEALLAEEEQQ--RELTRRELFTTLVDRYYGVMVAAE---LVRTQDKLVASLEKHVDH 247
           G+  A  +EE      +LT  ++   + + YY V+V  +   ++ T  K V  +EK V +
Sbjct: 122 GLQAARSSEEYYNLTSQLTEEQIIELVANNYYQVLVNRQQLNVIDTNIKNVKIVEKIVSN 181

Query: 248 ARKLEAHGQIAKVERLNAEVALDNARVQASSSRRQYEMTNIALK-----SLLKKAETPSS 302
             K   +G   K++     V L N   Q              LK     S+  +   P++
Sbjct: 182 QYK---NGLARKIDVDRIMVNLTNLNTQREQVINAITQLENQLKFSMGMSVATQINLPAT 238

Query: 303 GLFIALSEPSLPQLAELTQKSHPALKLLDAKETQANGLIEVERGAYK----PTVFLYGNY 358
            L    + P      +L  ++   +KLL+ ++     L+ ++R AY     P++ L GNY
Sbjct: 239 ELTEVTTLPVFTDSIDLANRTE--VKLLNNQDK----LLSLQRKAYVAEYYPSLALTGNY 292

Query: 359 TLYEDDSLFAKMEPDWM--------LGVGFKMPLLSRDGRSGKVEAAHSALLQARHTKAQ 410
           T       F  ++ +          +G+  ++P+ +      K+  A   + +A+  + +
Sbjct: 293 TYSSQSDSFDFLKSNAAAIGYGASAVGLTLRVPIFNGFLTRSKIRQADVDIKKAKEDRRE 352

Query: 411 TREDLSLLLEQSFRQLRQAEEEYRALDSSRALAMENLRLRELAFNQGMSTSIERVDAELK 470
           +   L+L  E +  QLR      ++   +  LA E  +  +  +N G+++  + +D E  
Sbjct: 353 SVNALNLAYENAKIQLRNNLNTIKSQRKNADLAQEIYKSTQNNYNNGLASLTDLLDTENA 412

Query: 471 LTAVDTQQLGAKFRYVQAYARLMAISGQLDEFI 503
           LT+       A   Y  A  +L+  +G +   +
Sbjct: 413 LTSAQNSYTQALLNYKIAEIQLIKSNGNIKSLV 445