Pairwise Alignments

Query, 502 a.a., ribonuclease G (RefSeq) from Shewanella amazonensis SB2B

Subject, 340 a.a., ribonuclease E/G family protein from Phaeobacter inhibens DSM 17395

 Score = 94.0 bits (232), Expect = 7e-24
 Identities = 100/400 (25%), Positives = 174/400 (43%), Gaps = 64/400 (16%)

Query: 16  GSELLINVTPNEARVALVEHGVLQEVHIERRMKRGLVGNIYKGKISRVLPGMQAAFVDIG 75
           G  ++++        AL+  G L+++ I+        G IY+ +  R + G    F+   
Sbjct: 3   GRTIILDHIDGREAAALMVDGQLEDLLIDSDAPTP--GTIYRARADRPVKGQGGMFLTTP 60

Query: 76  LDKAAFLHASDIMPHTECVADVEKGNFVVRDIAELVRQGQDIMVQVVKDPLGTKGARLTT 135
            D  AFL                     V+ +A     GQ+++VQ+       K   ++ 
Sbjct: 61  -DGPAFLRQ-------------------VKGLAP----GQELLVQLTGYAEAGKALPVSQ 96

Query: 136 DITLPSRYLVFMPGSAHVGVSQRIESEDERTRLKEATLPFVDEDG-GFIIRTAAEGAGAE 194
            +   SRY +  P +  + +S+ I  E+ER RL E     + + G G I+R+A +GA + 
Sbjct: 97  KLLFKSRYAIITPEAPGLNISRSIRDEEERDRLLEIAHDAIGDSGYGLILRSACDGADST 156

Query: 195 ELAQDAAFLRRVWAKVAERRKRKGSSLLYQDLALPVRIVRDFVGTDLDRIQVDSRSTFEE 254
           ++ +D   +  + ++V E     G  +L +     +   RD+  TD              
Sbjct: 157 DIEEDILAMVSLASQVLEDAG-SGPEVLAEGDTPHLLAWRDW--TD-------------- 199

Query: 255 LKHFAQEFMPEFEEKIELYSGSVPIFDLYDVENEIQRALGRKVELKSGGYLIIDQTEAMT 314
                          IE  +G    F+   V + ++   G +  L  G +L I+QT A+ 
Sbjct: 200 ------------PADIEREAGG---FERLGVLDALETVRGIREPLSGGAFLFIEQTRALV 244

Query: 315 TVDINTGAFVGHRNLEETIFNTNLEATQAIARQLRLRNLGGIIIIDFIDMLSEDHRQRVL 374
            VD+NTGA     +L   +   N+   +++AR LRLR LGG I++D   M  +D R+   
Sbjct: 245 AVDVNTGA---DTSLAAGV-KANMACAKSLARALRLRGLGGQIVVDPAPMPKKD-RRAFE 299

Query: 375 SSLTSALAHDRVKTNVSGFSGLGLVEMTRKRTRESLEHVL 414
           ++L ++   D   T + G++ LG  E+ RKR R  L+ VL
Sbjct: 300 TALRASFRSDSEDTVLVGWTTLGHFELQRKRGRIPLKEVL 339