Pairwise Alignments

Query, 490 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 330 a.a., permease (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 62.8 bits (151), Expect = 2e-14
 Identities = 44/132 (33%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 3   LNNFLHLFLESAPWLLLGLFLA----GMLKMFVPMAWMQKQLGGHGFKA-TVKAALLGAP 57
           L   +  FL   P +L+ L L     G+++ F      ++ L G G     V AALLG  
Sbjct: 35  LGEAVEFFLYDTPKVLMLLSLVVFGIGLVRSFFTPQRTRRLLAGRGEAVGNVLAALLGIV 94

Query: 58  LPLCSCGVIPAAVGLRRSGASKAATTSFLVSTPETGVDSVTVSYVLLGPFMAIVRPIAAV 117
            P CSC  +P  +G   +G     T SFLVS P     +V + Y LLG  +A +     +
Sbjct: 95  TPFCSCSAVPLFIGFVSAGVPLGVTFSFLVSAPMINEIAVVMLYGLLGWKVAALYAGTGL 154

Query: 118 TSAIVAGLLVGR 129
             AIV+G ++GR
Sbjct: 155 AIAIVSGWIIGR 166



 Score = 58.9 bits (141), Expect = 3e-13
 Identities = 46/130 (35%), Positives = 66/130 (50%), Gaps = 4/130 (3%)

Query: 311 VYASTDLVRDTAIWLLIGLFFAALVQTYVPADFLAQ-WGNGIL-AMLVMVLVSIPMYICA 368
           V A  D+V     W+++G+   A +  YVP  F+A   G G   A+ + V + IPMY  A
Sbjct: 202 VQAMRDIVGKVWPWVVLGIAVGAGIHGYVPEGFMASIMGRGAWWAVPLAVAIGIPMYSNA 261

Query: 369 TASTPIAAGLLLAGVSPGAVLVFMMAGPATNIATLGVVTKELGKRALFGYLGGV-LGVAL 427
               P+   LL  G + G VL FMMA  A ++    ++ + L  R +  + G V LG+ L
Sbjct: 262 AGMIPVVQALLGKGAALGTVLAFMMAVIALSLPEAVMLRRVLKPRLVAVFFGVVGLGIML 321

Query: 428 VFGVLVNYLV 437
           V G L N LV
Sbjct: 322 V-GYLFNALV 330



 Score = 39.3 bits (90), Expect = 2e-07
 Identities = 22/97 (22%), Positives = 44/97 (45%)

Query: 15  PWLLLGLFLAGMLKMFVPMAWMQKQLGGHGFKATVKAALLGAPLPLCSCGVIPAAVGLRR 74
           PW++LG+ +   +  +VP  +M   +G   + A   A  +G P+   + G+IP    L  
Sbjct: 214 PWVVLGIAVGAGIHGYVPEGFMASIMGRGAWWAVPLAVAIGIPMYSNAAGMIPVVQALLG 273

Query: 75  SGASKAATTSFLVSTPETGVDSVTVSYVLLGPFMAIV 111
            GA+     +F+++     +    +   +L P +  V
Sbjct: 274 KGAALGTVLAFMMAVIALSLPEAVMLRRVLKPRLVAV 310