Pairwise Alignments

Query, 490 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 497 a.a., permease (RefSeq) from Shewanella sp. ANA-3

 Score =  572 bits (1474), Expect = e-167
 Identities = 310/499 (62%), Positives = 363/499 (72%), Gaps = 11/499 (2%)

Query: 1   MLLNNFLHLFLESAPWLLLGLFLAGMLKMFVPMAWMQKQLGGHGFKATVKAALLGAPLPL 60
           MLL NF+ LFL+SAPWLLLGL LAG+LK+FVPMAWMQKQLGGHGFK  VKAALLGAPLPL
Sbjct: 1   MLLKNFIDLFLDSAPWLLLGLILAGLLKVFVPMAWMQKQLGGHGFKTVVKAALLGAPLPL 60

Query: 61  CSCGVIPAAVGLRRSGASKAATTSFLVSTPETGVDSVTVSYVLLGPFMAIVRPIAAVTSA 120
           CSCGVIPAAVGLRRSGASKAATTSFLVSTPETGVDSVTVSYVLLGPFMAIVRPIAA+TSA
Sbjct: 61  CSCGVIPAAVGLRRSGASKAATTSFLVSTPETGVDSVTVSYVLLGPFMAIVRPIAAITSA 120

Query: 121 IVAGLLVGRDEDTPDNASQSAETSSDKQSDKPITQAAKPAMSFKPVAANSPLMTPTGAKL 180
           IVAGLLVGRD+D    A+++       QS K +  AA  A      ++++  +    A +
Sbjct: 121 IVAGLLVGRDDDDGKPAAKAEAQLDKAQSGKALASAAPVASCCASKSSSAETVVKAEA-V 179

Query: 181 AAAPAVSFKPVAENTGRSCCSGNAEAEP--KPESKPQPKSELRQESCCAPKAVAASCCDT 238
            +  A +  P       SCCS +    P  +P+ K  P +     +   P     +    
Sbjct: 180 KSCCASTKAPAITPVKSSCCSSDDAKAPATEPKIKMTPMAAPSLMATGGPTVGMVNVAKG 239

Query: 239 NASCCDAKPAAETASCCSP------KVVVPEASSCCAASSTSASTATSADTGCCGSTEQD 292
           + +  +        SCC        K+VV +  +CC  SS +  +  +    CC ST QD
Sbjct: 240 DGAKANPVKVESAGSCCGTQTAAPEKIVVVKKGACCGTSSKATDSHQAEGESCCAST-QD 298

Query: 293 ARPANQPASVIERIWDGLVYASTDLVRDTAIWLLIGLFFAALVQTYVPADFLAQWGNGIL 352
                +  SVI RI  GL YA+TDLVRDT +WLL+GLFFAALVQTYVPADFLA+WG+G+L
Sbjct: 299 MATELKSESVIARIGLGLKYAATDLVRDTTLWLLVGLFFAALVQTYVPADFLAKWGDGLL 358

Query: 353 AMLVMVLVSIPMYICATASTPIAAGLLLAGVSPGAVLVFMMAGPATNIATLGVVTKELGK 412
           AMLVMVLVS+PMYICATASTPIAAGLLLAGVSPGAVLVFMMAGPATNIATLGVVTKELGK
Sbjct: 359 AMLVMVLVSVPMYICATASTPIAAGLLLAGVSPGAVLVFMMAGPATNIATLGVVTKELGK 418

Query: 413 RALFGYLGGVLGVALVFGVLVNYLVATFGFEVAPQIGEEHAMLPDWLVASSGLLLAFLMG 472
           RAL+GYLGGVLGVALV G LVNYLVA FGFEV PQIGE+H MLP+WLVA+SG++LA LM 
Sbjct: 419 RALYGYLGGVLGVALVAGALVNYLVANFGFEVMPQIGEQHQMLPEWLVAASGIVLALLMA 478

Query: 473 RVLWQKLPRK-QKTGGCCS 490
           +V+++K+PR   +   CCS
Sbjct: 479 KVVFEKIPRSWLRRSDCCS 497