Pairwise Alignments

Query, 419 a.a., type IV pilus biogenesis protein PilC (RefSeq) from Shewanella amazonensis SB2B

Subject, 405 a.a., Type IV fimbrial assembly protein PilC from Pseudomonas fluorescens FW300-N2E2

 Score =  427 bits (1099), Expect = e-124
 Identities = 211/402 (52%), Positives = 302/402 (75%), Gaps = 1/402 (0%)

Query: 17  APKVYNFEWKGLNRDGKKSSGELRGASVAEIKTLLKNQGINPKVVRKKSDGLFGASNKKI 76
           A K   + W+G +R G K SGEL G S A +K  L+ QGINP+ VRKKS  +F +  K+I
Sbjct: 5   AVKTDVYTWEGKDRKGTKMSGELTGQSPALVKAQLRKQGINPQKVRKKSTSIF-SKGKRI 63

Query: 77  NAMDIAMVTRQIATMLMAGVPLVTTIEILGKGHEKPKMRELLGTILNDIQAGIPLSDALR 136
             +DIA+ TRQ+ATML AGVPL+   +I+G+G + P MR+L+  +  ++ AG   + ALR
Sbjct: 64  KPLDIALFTRQMATMLKAGVPLLQAFDIIGEGFDNPSMRKLVDEVKQEVAAGNSFAAALR 123

Query: 137 PHRIYFDDLYVDLVAAGEHSGSLDTVFDRIATYREKAEALKSKIKKAMFYPAAVVVVAIA 196
               YFD+LY +LV AGE +G+LDT+ DR+ATY+EK+EALK+KIKKAM YPAAVV+VA  
Sbjct: 124 KCPQYFDELYCNLVDAGEQAGALDTLLDRVATYKEKSEALKAKIKKAMTYPAAVVLVAAV 183

Query: 197 VTTLLLLFVVPQFEEIFTSFGAELPAFTQLIINISRFLQSSWYFFLTAIVGSIWLYVRAH 256
           VT +LL+ VVPQFE +F+ FGA+LPAFT ++I +S  +Q  W+  L  ++G+ +    A 
Sbjct: 184 VTGILLVKVVPQFESVFSGFGAQLPAFTVMVIGLSEIMQQWWWVMLGGLMGAFFGVKYAL 243

Query: 257 RNSQAVRDRQDEFVLKIPVIGEILHKAAMARFARTLATTFAAGVPLIDGLESAAGASGNA 316
           R S+  RD +D+++LK+P+IG +L+K+A+AR+ARTL+TTFAAGVPL++ L+S +GA+GN 
Sbjct: 244 RRSERFRDWRDKWLLKLPLIGTLLYKSAVARYARTLSTTFAAGVPLVEALDSVSGATGNV 303

Query: 317 VYRKALLRIRTEVMAGMQMNVAMRTVNLFPDMLIQMVMIGEESGSLDNMLNKIANIYEMQ 376
           V++ A+ RI+ EV  GMQ+N +MR   +FP++ +QM  IGEESG+LD+ML+K+A+ YE +
Sbjct: 304 VFKHAVQRIKQEVSTGMQLNFSMRASGIFPNLAVQMTAIGEESGALDDMLDKVASFYEAE 363

Query: 377 VDDAVDGLSSLIEPIMMVVIGTLVGGLIVGMYLPIFQMGNVV 418
           VD+ VD L+SL+EP +MVV+G +VGGL+V MYLPIFQ+G+ +
Sbjct: 364 VDNLVDNLTSLMEPFIMVVLGVVVGGLVVAMYLPIFQLGSAI 405