Pairwise Alignments

Query, 419 a.a., type IV pilus biogenesis protein PilC (RefSeq) from Shewanella amazonensis SB2B

Subject, 399 a.a., type II secretory pathway, component PulF from Dechlorosoma suillum PS

 Score =  208 bits (529), Expect = 3e-58
 Identities = 116/394 (29%), Positives = 211/394 (53%), Gaps = 6/394 (1%)

Query: 23  FEWKGLNRDGKKSSGELRGASVAEIKTLLKNQGIN-PKVVRKKSDGLFGASNKKINAMDI 81
           F +K ++ DG+   G L   ++ +++  LK   ++        S  +FG S  +   ++ 
Sbjct: 4   FNYKAVDADGRMIQGRLDAINLVDLEMRLKRMEMDLVNGTPVSSWDMFGGSVPRRELINF 63

Query: 82  AMVTRQIATMLMAGVPLVTTIEILGKGHEKPKMRELLGTILNDIQAGIPLSDALRPHRIY 141
                Q+     AGVP++  +  L    E P+ RE++ +++  I+ G  LS A+  H   
Sbjct: 64  CFHLEQLNR---AGVPILEGLSDLRDSLEHPRFREVIASLVESIEGGQTLSQAMALHPRV 120

Query: 142 FDDLYVDLVAAGEHSGSLDTVFDRIATYREKAEALKSKIKKAMFYPAAVVVVAIAVTTLL 201
           F  ++V LV AGE +G L  V   +    +  + + S+ KK + YPA V  + +  T  L
Sbjct: 121 FTKVFVSLVRAGELTGQLSEVLQNLTESLKWEDEIASQTKKLLMYPAFVGTIVLGATFFL 180

Query: 202 LLFVVPQFEEIFTSFGAELPAFTQLIINISRFLQSSWYF-FLTAIVGSIWLYVRAHRNSQ 260
           ++++VPQ ++   + G ELPA T+ +  +S  L + WY   L  I+G   L    H N  
Sbjct: 181 MVYMVPQLKQFVRNMGQELPAQTRALFFVSDLLVNYWYLALLLPILGIALLSYLLHTNP- 239

Query: 261 AVRDRQDEFVLKIPVIGEILHKAAMARFARTLATTFAAGVPLIDGLESAAGASGNAVYRK 320
           AVR   D F LK+PV G IL K  ++RFA T A  +++G+P+++ + +     GN V R+
Sbjct: 240 AVRHGFDAFKLKLPVFGPILKKIVLSRFANTFALLYSSGIPILESIRTTEEVVGNRVIRQ 299

Query: 321 ALLRIRTEVMAGMQMNVAMRTVNLFPDMLIQMVMIGEESGSLDNMLNKIANIYEMQVDDA 380
            L ++   +  G  +  A  T+ LFP ++I+M+ +GE +GSLD  L  ++  +   V ++
Sbjct: 300 GLEKVEQLIGEGQNVTTAFHTIGLFPPLVIRMLRVGESTGSLDTALRNVSYFFNRDVKES 359

Query: 381 VDGLSSLIEPIMMVVIGTLVGGLIVGMYLPIFQM 414
           V+ + SLIEP + +++G+++G +++ +  P++ +
Sbjct: 360 VEKIQSLIEPALTLILGSVLGWIMLAVLGPVYDV 393