Pairwise Alignments

Query, 419 a.a., type IV pilus biogenesis protein PilC (RefSeq) from Shewanella amazonensis SB2B

Subject, 414 a.a., type II secretory pathway, component PulF from Dechlorosoma suillum PS

 Score =  389 bits (999), Expect = e-113
 Identities = 195/417 (46%), Positives = 292/417 (70%), Gaps = 6/417 (1%)

Query: 4   AVANKSKKQTQKLAPKV--YNFEWKGLNRDGKKSSGELRGASVAEIKTLLKNQGINPKVV 61
           A A K+ + T++  P +  + F W+G ++ GK   GELR  S   ++  L+ QG+   +V
Sbjct: 2   ATAGKNTQNTKRADPSIKEFVFVWEGKDKTGKIIRGELRATSETVVQATLRRQGV---LV 58

Query: 62  RKKSDGLFGASNKKINAMDIAMVTRQIATMLMAGVPLVTTIEILGKGHEKPKMRELLGTI 121
            K S   F  S  KI   DI + TRQ+ATM+ +GVPL+   +I+GKGH  P + +LL  I
Sbjct: 59  TKVSKQRF-KSGGKITDKDITLFTRQLATMMKSGVPLLQAFDIVGKGHSNPAVGKLLLDI 117

Query: 122 LNDIQAGIPLSDALRPHRIYFDDLYVDLVAAGEHSGSLDTVFDRIATYREKAEALKSKIK 181
             D++ G  L+ A R + +YFD L+ +L+ AGE +G LDT+ DR+A Y+EK  A+KSKIK
Sbjct: 118 KADVETGSALNQAFRKYPLYFDSLFCNLIGAGEQAGILDTLLDRLAIYKEKILAVKSKIK 177

Query: 182 KAMFYPAAVVVVAIAVTTLLLLFVVPQFEEIFTSFGAELPAFTQLIINISRFLQSSWYFF 241
            A+FYP AV+VVA  +T ++++FV+P F+E+F SFGA+LPA T ++I IS F  + WY  
Sbjct: 178 SALFYPIAVIVVAFCITAVIMIFVIPAFKEVFKSFGADLPAPTLVVIAISDFFVAYWYLI 237

Query: 242 LTAIVGSIWLYVRAHRNSQAVRDRQDEFVLKIPVIGEILHKAAMARFARTLATTFAAGVP 301
              + G I+ ++ + + S+AV+   D+ +L++P+ G ++ K+ +AR+ RTLAT FAAGVP
Sbjct: 238 FGILGGGIYSFLESWKRSEAVQIAMDKALLRMPIFGPLIRKSVIARWTRTLATMFAAGVP 297

Query: 302 LIDGLESAAGASGNAVYRKALLRIRTEVMAGMQMNVAMRTVNLFPDMLIQMVMIGEESGS 361
           L++ L+S  GASGN VY+ A  +I++EV  G  +  +M+ VNLFP+M+IQMV IGEESG+
Sbjct: 298 LVEALDSVGGASGNHVYKMATRQIQSEVSTGTSLTNSMQNVNLFPNMVIQMVAIGEESGA 357

Query: 362 LDNMLNKIANIYEMQVDDAVDGLSSLIEPIMMVVIGTLVGGLIVGMYLPIFQMGNVV 418
           LD+ML+K+A+ +E +VDD+V  LSSL+EPI+MV++G L+GG++V MYLPIF+MG+VV
Sbjct: 358 LDSMLSKVADFFEAEVDDSVAALSSLMEPIIMVILGVLIGGMVVAMYLPIFKMGSVV 414