Pairwise Alignments

Query, 419 a.a., type IV pilus biogenesis protein PilC (RefSeq) from Shewanella amazonensis SB2B

Subject, 405 a.a., type II secretion system protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  200 bits (509), Expect = 6e-56
 Identities = 120/399 (30%), Positives = 208/399 (52%), Gaps = 5/399 (1%)

Query: 23  FEWKGLNRDGKKSSGELRGASVAEIKTLLKNQGINPKVVRKKSDGL-FGASNKKINAM-- 79
           + +  LN  G    G +   S    + LL ++G  P  V+ +     FGA    +N +  
Sbjct: 4   YVYTALNEHGVNMQGTIDAESPDTARALLLSRGYVPMKVKTQGASFDFGALGDILNPVKP 63

Query: 80  -DIAMVTRQIATMLMAGVPLVTTIEILGKGHEKPKMRELLGTILNDIQAGIPLSDALRPH 138
            ++ + T+Q  T+  AG+P+   +++L    E  +++++   +   I  G  L DA R H
Sbjct: 64  KELILFTKQFRTLFQAGIPITQLLQVLQNQTESKRLKQIAADMAQSIVGGSTLYDAFRAH 123

Query: 139 RIYFDDLYVDLVAAGEHSGSLDTVFDRIATYREKAEALKSKIKKAMFYPAAVVVVAIAVT 198
              F +LY  ++ AGE SG+L  V +R+    E    ++S IK AM YP  VV   +A  
Sbjct: 124 PRVFSELYCSMMRAGEASGALGDVMERLVYLLEHEHKIRSDIKSAMRYPKMVVSALLAAF 183

Query: 199 TLLLLFVVPQFEEIFTSFGAELPAFTQLIINISRFLQSSWYFFLTAIVGSIWLYVRAHRN 258
            +LL  V+P+F  IF     ELP  TQ+ + +   + + W   L  +V +I  Y    R 
Sbjct: 184 FILLNVVIPKFVVIFARAKIELPWPTQVAMGMHYIMTTYWPIVLGLLVAAIAGYKWWVR- 242

Query: 259 SQAVRDRQDEFVLKIPVIGEILHKAAMARFARTLATTFAAGVPLIDGLESAAGASGNAVY 318
           + A +  +D  +L +P+IG +L K+ MARFA   +   ++GV ++D L+      GNA  
Sbjct: 243 TPAGKYWRDYTLLHVPIIGPVLQKSVMARFASIFSILQSSGVTVLDALDVLTNTIGNAAI 302

Query: 319 RKALLRIRTEVMAGMQMNVAMRTVNLFPDMLIQMVMIGEESGSLDNMLNKIANIYEMQVD 378
                +I+ ++  G  +   +++   F  ++I MV IGEESGSLD+MLN +A  Y+ +V+
Sbjct: 303 ASEFRKIQDKLREGRGIADPLKSAKFFTPLVINMVAIGEESGSLDSMLNDVARHYDEEVE 362

Query: 379 DAVDGLSSLIEPIMMVVIGTLVGGLIVGMYLPIFQMGNV 417
            AV G+S  I P++++ +  +VG   + +++P++ +  V
Sbjct: 363 YAVAGMSEAIGPVLIIALAAVVGFFALAIFMPMWDLTKV 401