Pairwise Alignments

Query, 419 a.a., type IV pilus biogenesis protein PilC (RefSeq) from Shewanella amazonensis SB2B

Subject, 406 a.a., type II secretion system protein (RefSeq) from Shewanella sp. ANA-3

 Score =  221 bits (563), Expect = 3e-62
 Identities = 121/400 (30%), Positives = 223/400 (55%), Gaps = 5/400 (1%)

Query: 23  FEWKGLNRDGKKSSGELRGASVAEIKTLLKNQGINPKVVR----KKSDGLFGASNKKINA 78
           ++++G +  G+  +G+L  AS      +L  +GI P  V+     KS  L     +K+  
Sbjct: 4   YQYRGRSGQGQAVTGQLDAASEGAAADMLLARGIIPLEVKVAKETKSFTLAQLFKRKVGL 63

Query: 79  MDIAMVTRQIATMLMAGVPLVTTIEILGKGHEKPKMRELLGTILNDIQAGIPLSDALRPH 138
            ++ + TRQ+ ++  +G+P++  I  L +     +M++ L  I   + AG PLS A+  H
Sbjct: 64  DELQIFTRQMYSLTRSGIPILRAIAGLSETAHSQRMKDALNDISEQLTAGRPLSSAMNQH 123

Query: 139 RIYFDDLYVDLVAAGEHSGSLDTVFDRIATYREKAEALKSKIKKAMFYPAAVVVVAIAVT 198
              FD L+V +V  GE++G L+  F +++ Y E+ +  + +IK AM YP  V++      
Sbjct: 124 PDVFDSLFVSMVHVGENTGKLEDAFIQLSGYIEREQETRRRIKAAMRYPIFVLIAIALAM 183

Query: 199 TLLLLFVVPQFEEIFTSFGAELPAFTQLIINISRFLQSSWYFFLTAIVGSIWLYVRAHRN 258
            +L + V+P+F E+F  FGA+LP  T+++I  S    + W   L  ++G+I + +R   +
Sbjct: 184 VILNIMVIPKFAEMFARFGADLPWATKVLIGTSNLFVNYWPLMLVILLGTI-IGIRYWHH 242

Query: 259 SQAVRDRQDEFVLKIPVIGEILHKAAMARFARTLATTFAAGVPLIDGLESAAGASGNAVY 318
           ++    + D++ L IP +G I+ ++ ++R+ R+ +   +AGVP+   L   A A  NA  
Sbjct: 243 TEKGEKQWDKWKLHIPAVGSIIERSTLSRYCRSFSMMLSAGVPMTQALSLVADAVDNAYM 302

Query: 319 RKALLRIRTEVMAGMQMNVAMRTVNLFPDMLIQMVMIGEESGSLDNMLNKIANIYEMQVD 378
              ++ +R  + +G  M        LF  +++QMV +GEE+G +D +LN  A+ YE +VD
Sbjct: 303 HDKIVGMRRGIESGESMLRVSNQSKLFTPLVLQMVAVGEETGQIDQLLNDAADFYEGEVD 362

Query: 379 DAVDGLSSLIEPIMMVVIGTLVGGLIVGMYLPIFQMGNVV 418
             +  L++ +EPI++ ++  +V  L +G+YLP++ M NVV
Sbjct: 363 YDLKNLTAKLEPILIGIVAAIVLVLALGIYLPMWDMLNVV 402