Pairwise Alignments

Query, 419 a.a., type IV pilus biogenesis protein PilC (RefSeq) from Shewanella amazonensis SB2B

Subject, 423 a.a., type II secretion system protein (RefSeq) from Shewanella sp. ANA-3

 Score =  671 bits (1732), Expect = 0.0
 Identities = 348/422 (82%), Positives = 378/422 (89%), Gaps = 3/422 (0%)

Query: 1   MATAVANK---SKKQTQKLAPKVYNFEWKGLNRDGKKSSGELRGASVAEIKTLLKNQGIN 57
           MATA   K   +KK  QK  PK+Y FEWKGLNRDG+K+SGELRGAS AEI++ LK+QG+N
Sbjct: 1   MATATTVKKPRAKKSEQKSQPKIYTFEWKGLNRDGQKTSGELRGASAAEIRSQLKSQGVN 60

Query: 58  PKVVRKKSDGLFGASNKKINAMDIAMVTRQIATMLMAGVPLVTTIEILGKGHEKPKMREL 117
           PK VRK+S  LF   + KI+ MDIAM+TRQIATML AGVPLVTTIE+LG+GHEK KMREL
Sbjct: 61  PKTVRKQSAALFKLGDAKISPMDIAMITRQIATMLAAGVPLVTTIELLGRGHEKAKMREL 120

Query: 118 LGTILNDIQAGIPLSDALRPHRIYFDDLYVDLVAAGEHSGSLDTVFDRIATYREKAEALK 177
           LG+IL++IQ+GIPLSD+LRPHR YFDDLYVDLVAAGEHSGSLD VFDRIATYREK+EALK
Sbjct: 121 LGSILSEIQSGIPLSDSLRPHRRYFDDLYVDLVAAGEHSGSLDVVFDRIATYREKSEALK 180

Query: 178 SKIKKAMFYPAAVVVVAIAVTTLLLLFVVPQFEEIFTSFGAELPAFTQLIINISRFLQSS 237
           SKIKKAMFYPAAVVVVAI VTTLLLLFVVPQFEEIF  FGAELPAFTQL+++ISR LQSS
Sbjct: 181 SKIKKAMFYPAAVVVVAILVTTLLLLFVVPQFEEIFKGFGAELPAFTQLVLHISRGLQSS 240

Query: 238 WYFFLTAIVGSIWLYVRAHRNSQAVRDRQDEFVLKIPVIGEILHKAAMARFARTLATTFA 297
           WY FL AIV  ++L+VRAHRNSQ VRDR DE VLKIP IG ILHK AMARFARTLATTFA
Sbjct: 241 WYIFLGAIVAGVFLFVRAHRNSQMVRDRVDEAVLKIPAIGPILHKGAMARFARTLATTFA 300

Query: 298 AGVPLIDGLESAAGASGNAVYRKALLRIRTEVMAGMQMNVAMRTVNLFPDMLIQMVMIGE 357
           AGVPLIDGLESAAGASGNAVYRKA+L+IR EVMAGMQMNVAMRT  LFPDMLIQMVMIGE
Sbjct: 301 AGVPLIDGLESAAGASGNAVYRKAILKIRQEVMAGMQMNVAMRTTGLFPDMLIQMVMIGE 360

Query: 358 ESGSLDNMLNKIANIYEMQVDDAVDGLSSLIEPIMMVVIGTLVGGLIVGMYLPIFQMGNV 417
           ESGSLDNMLNK+ANIYEMQVDDAVDGLSSLIEPIMMVVIGT+VGGLIV MYLPIFQMG V
Sbjct: 361 ESGSLDNMLNKVANIYEMQVDDAVDGLSSLIEPIMMVVIGTVVGGLIVAMYLPIFQMGKV 420

Query: 418 VG 419
           VG
Sbjct: 421 VG 422