Pairwise Alignments

Query, 607 a.a., ATP-dependent DNA helicase RecQ (RefSeq) from Shewanella amazonensis SB2B

Subject, 621 a.a., ATP-dependent DNA helicase RecQ from Cupriavidus basilensis FW507-4G11

 Score =  499 bits (1284), Expect = e-145
 Identities = 281/611 (45%), Positives = 378/611 (61%), Gaps = 26/611 (4%)

Query: 17  LQQVFGYRDFRPGQREVMTRVCQGEDCLVIMPTGGGKSLCYQVPALVLP----GVTLVVS 72
           L+ VFGY  FR  Q E++  V  G DCLV+MPTGGGKSLCYQ+PAL+      G  +VVS
Sbjct: 8   LKDVFGYHAFRGRQGEIIDHVADGGDCLVLMPTGGGKSLCYQIPALLRQRAGQGTGIVVS 67

Query: 73  PLISLMKDQVDSLIQSGVAAAYLNSSQPREQAIEVLRQLRFGELKLLYVSPERLLQGDFL 132
           PLI+LM+DQV +L ++GV AA LNS+    +A  V R L  G L++LYV+PERL+   F 
Sbjct: 68  PLIALMQDQVAALSEAGVRAAVLNSTLSGAEASAVERDLLAGRLEILYVAPERLMTPRFQ 127

Query: 133 SRLDELHISLFAVDEAHCISEWGHDFRPEYAALGQLKQRFPHVPVMALTATADEATRSSI 192
             L    I +FA+DEAHC+S+WGHDFRPEY  L  L +RFP VP +ALTATAD  TR  I
Sbjct: 128 DLLQRTRIGVFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPEVPRIALTATADSVTREEI 187

Query: 193 CERLGIQPFQ-HLASFDRPNIRYTVAEKLNAANQLRQFIQSQKGA------NGIVYCSSR 245
            ERL +   +  ++SFDRPNIRY + EK NA  QL  FI+++  A      +GIVYC SR
Sbjct: 188 VERLALHDARVFVSSFDRPNIRYRIVEKDNARQQLLAFIKAEHLAADGTHDSGIVYCLSR 247

Query: 246 RRVDEVAERLRQQGFYAEGYHAGMTQDERASVQDRFLKDQIDVVVATVAFGMGINKSNVR 305
           ++V++ A  L  QG  A  YHAGM    R   Q RF +++  ++VAT+AFGMGI+K +VR
Sbjct: 248 KKVEDTASYLSAQGLNALAYHAGMDAGVRQHHQARFREEEGVIMVATIAFGMGIDKPDVR 307

Query: 306 FVVHYDIPKSIESYYQETGRAGRDGLDAEALLLFDPADIGRVRHLIEQQE-PGPQQQVEF 364
           FV H D+PKS+E YYQETGRAGRDGL A A + +   D+ + + +I++ E     ++V  
Sbjct: 308 FVAHLDLPKSMEGYYQETGRAGRDGLPANAWMAYGLGDVVQQKRMIDESEADDAHKRVSS 367

Query: 365 HKLYSMAAFAEAQTCRRQVLLHYFGEAANEPCGNCDICIDPPKRYNGTEDAQKVLSCIYR 424
            KL ++    E   CRR  +L YF E A+EPCGNCD C++PP  ++GT +AQ  LSC+YR
Sbjct: 368 AKLDALLGLCETAGCRRVRILGYFDE-ASEPCGNCDTCLEPPATWDGTREAQMALSCVYR 426

Query: 425 LNQ----RFGVNHLIEVLRGSKAASVVDRGHDKLSTWGIGKEKSTEYWLSVTRQLIHLGL 480
             Q     FG  H+++VLRG+ +  +   GHDK+ST+GIG ++S   W ++ RQLI  GL
Sbjct: 427 TAQASRVHFGATHMVDVLRGNASEKIRQWGHDKVSTFGIGADRSVSEWHAIFRQLIAHGL 486

Query: 481 ASQDITRGSSVRLNSAARPVLKGEVALML----AEPRLSLSDVPRKRTSSRTPQ--NYDR 534
              D     ++ L  AAR VLKGE+ + L    ++P  S     R    +RT      D 
Sbjct: 487 LVIDHGGHGALLLGDAARAVLKGEMPITLRRQASKPAKSGERGVRGSAGTRTDHTAGMDT 546

Query: 535 KLFAR---LKNLRRTIAEEQDVPPYLVFNDATLAEMAWMLPKSEAELLAVNGVGERKLAR 591
           +  A    L+  R   A E  VP Y++F+DATLAE+A   P S   +  V G+G  KL R
Sbjct: 547 EALANWEALRKWRTETAREHGVPAYVIFHDATLAELARSAPDSLTAMAEVPGIGAAKLER 606

Query: 592 FGGEFLDEIAA 602
           +G   L+ + A
Sbjct: 607 YGDAILEALGA 617