Pairwise Alignments

Query, 951 a.a., endonuclease (RefSeq) from Shewanella amazonensis SB2B

Subject, 747 a.a., Serine phosphatase RsbU, regulator of sigma subunit from Pseudomonas fluorescens FW300-N2E2

 Score = 80.5 bits (197), Expect = 4e-19
 Identities = 129/532 (24%), Positives = 218/532 (40%), Gaps = 79/532 (14%)

Query: 131 DRRGLVVGHVQSGKTGNYTGLICKAADAGYKIIIVLAGMHNNLRSQTQIRLDEGFLGFTT 190
           +R G+++G +QSGKT  + G+I +A D GY I IVL      L  QT  R+    L F  
Sbjct: 67  NRPGMLLGKIQSGKTRAFLGVIARAFDRGYDIAIVLTKGTKTLAKQTVKRIG---LDFKE 123

Query: 191 SVIQDEMHIVGVGEIDRDPAIRPNFATNRSEKGDFNTKAAKHLGISPEERPWLFVVKKNK 250
            + QDE+ +                         F+  +A     + E R  + +V K +
Sbjct: 124 FIEQDEIFL-------------------------FDIMSAPDRLTNSELRRKIVIVAKKQ 158

Query: 251 SVLERLLKWIQDHVANIQDPETGRKLVTHLPLLIIDDEADNASVDTGDQAYDEFGKPDLE 310
           S           ++A I+D       +    +L++DDEAD ASV    +      K   E
Sbjct: 159 S----------QNLARIEDLFNAYSSLKQRRVLLVDDEADMASVRFSKK------KGSRE 202

Query: 311 HEPTAINRLTRRILHSFTRKAYVGYTATPFANIFIHNRSETEKEGPDLF---PSAFIANL 367
                I      +    +R +++  TATP+A        E   E  ++F      F   L
Sbjct: 203 VAQGTIASQMDALRAGLSRISFLQVTATPYALYLQPESYEQVNESQEVFYPKRPMFTEVL 262

Query: 368 SASSSYIGPAKVFGRSSENGREGGLPLVKVVNDHCSEDEKSGWMPTKHRNGYYPSSDQ-- 425
               +YIG    FG    +G E     + +  D    D        +  +G    SD+  
Sbjct: 263 PIHGAYIGGDAYFG---GHGPEDPRHYLFIEVDEKEHD------ALRSSDGRVIRSDRLW 313

Query: 426 -QHGIPESLRESVDAFVLACAARRLRGQKDEHCSMLIHVTRFTSVQGHVKEQVAAYVDW- 483
               I ++LR S+  F+LA A RR + Q+     + + + ++  +  +  ++ A    W 
Sbjct: 314 ISENI-KTLRLSLITFILAVAIRREQQQE-----LDLPLLKYAMIIHNDTQRAAHSWQWD 367

Query: 484 --LKRRLVRRIDHYDVINQLKQLWESDFLATTETIHSMHPDMVDENTLTWSQVEAELSDA 541
             LK   V          +LK L++  +     ++H+ +   +  +   +  V   +SD 
Sbjct: 368 TVLKLITVFEDAAVSADERLKALFDEAYADLKRSVHA-NRGHLPTSRKAFKAVCELISD- 425

Query: 542 ISEIEVRAINGFAK-EAL---DYADSAVGLKV-IAVGGDKLARGLTLEGLCVSYFLRASR 596
             E+ V+ +N   + E+L   + A+  +  KV I +GG  L RG+T+  L   Y+ R  +
Sbjct: 426 -GEVNVQKVNSDVELESLLNQETAELQLRTKVNIFIGGSILDRGITVPNLLAFYYGRNPK 484

Query: 597 --MYDTLMQMGRWFGYRP-GYLDLCRLYTTIDLVEWFEHIADASEELREEFD 645
               DT++Q  R +G RP   L + R YT+  +      I D    LR+ F+
Sbjct: 485 RMQADTVLQHSRMYGARPIADLAVTRFYTSQGVYARLGVIHDLETALRQAFE 536