Pairwise Alignments

Query, 92 a.a., DNA-directed RNA polymerase subunit omega (RefSeq) from Shewanella amazonensis SB2B

Subject, 96 a.a., DNA-directed RNA polymerase subunit omega from Rhodanobacter denitrificans MT42

 Score = 71.6 bits (174), Expect = 2e-18
 Identities = 40/84 (47%), Positives = 59/84 (70%), Gaps = 3/84 (3%)

Query: 1  MARVTVEDAVKQIGNRFDMILVAARRARQIAVQGKDPMVEEQNDKPTVIALREIEKGLVN 60
          MAR+TVED ++ + NRF+++L+A +RARQ+  +G +P V   +DKPTV+ALREI    ++
Sbjct: 1  MARITVEDCLEVVDNRFELVLMATKRARQLE-KGAEPAVNPDHDKPTVLALREIAARRID 59

Query: 61 AGTLD-ADERQSVR-EREAAEIAA 82
            T+D  D+ +  R EREA E AA
Sbjct: 60 QATIDQIDKAERERAEREALEWAA 83