Pairwise Alignments

Query, 699 a.a., bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (RefSeq) from Shewanella amazonensis SB2B

Subject, 695 a.a., (p)ppGpp synthetase, RelA/SpoT family from Sphingomonas koreensis DSMZ 15582

 Score =  500 bits (1287), Expect = e-145
 Identities = 273/698 (39%), Positives = 411/698 (58%), Gaps = 17/698 (2%)

Query: 7   LKESASAYLDSGQVALLKQAYQVARDAHEGQMRTSGEPYITHPVAVAKILSDMRLDHETL 66
           L +   +Y      ALL +AY  +  AH  Q R SG+PY +HP+ VA IL+D+ LD ET+
Sbjct: 7   LVDRVLSYDPEADEALLNRAYVFSMHAHGSQKRASGDPYFSHPIEVAGILTDLHLDDETI 66

Query: 67  MAALLHDTIEDTHVTKEDLAELFGDAVADLVEGVSKLDKLKFRDKKEAQAENFRKMMMAM 126
             A+LHDTIEDT  T E++   FG +VA LV+GV+KL K++ + + E  AEN RK ++AM
Sbjct: 67  ATAILHDTIEDTVATPEEILSKFGPSVARLVDGVTKLSKIEAQTENERAAENLRKFLLAM 126

Query: 127 TQDIRVILIKLADRTHNMRTLGAL-RPDKRRRIARETLEIYAPIANRLGIHNIKTELEDL 185
           + DIRV+L+KLADR HNMRTL  + +P+KRRRIARET++IYAP+A R+G++   TE++ L
Sbjct: 127 SDDIRVLLVKLADRLHNMRTLHHIPKPEKRRRIARETMDIYAPLAERIGMYEFMTEMQTL 186

Query: 186 GFQAYYPMRYRVLKEVVKAARGNRKELIQNIKTGIQARLEDAGIHAKVKGREKNLYSIYN 245
            F+   P  Y  + + ++  +   ++ I  I +G +  L   G+ A+V GREK+ YSI+ 
Sbjct: 187 AFRELEPEAYESITKRLEGLKIEGEDRIAKIGSGFKLLLSRGGVDAEVLGREKHPYSIWK 246

Query: 246 KMRGKELQFQEVMDIYAFRVIVDSIDTCYRVLGAMHGLYKPRPGRFKDYIAIPKANGYQS 305
           KM  + + F+++ DI AFR IV + + CYR LG +H  +   PGRFKDYI+ PK NGY+S
Sbjct: 247 KMSERHVSFEQLSDIMAFRAIVGTEEECYRALGIIHRRWPFVPGRFKDYISTPKRNGYRS 306

Query: 306 LHTSLFGPHGVPVEIQIRTDDMDQMADKGVAAHWVYKNGNENGSTTTQVRARKWMQSLLE 365
           LHT++       VEIQIRT +M   A+ G+AAHW YK         TQVR   W+Q L+E
Sbjct: 307 LHTTVMHAGDTRVEIQIRTQEMHAQAEHGLAAHWAYKQSGVR--PDTQVR---WIQDLVE 361

Query: 366 LQQSASSSFEFVENVKTELFPDEIYVFTPEGRILELPVGATAVDFAYEVHTDVGNTCVGA 425
           + ++A S  E +E+ +  ++ D I+ FTP+G +++LP GAT +DFAY VHTD+G+  VGA
Sbjct: 362 ILETAESPEELLEHTRMAMYQDRIFAFTPKGELIQLPKGATPIDFAYAVHTDLGDQAVGA 421

Query: 426 RVNRQAYPLSQPLISGQTVEIITAKGAKPNAAWLNFVVTGKARAKIRQVLKNLKQDEAIA 485
           ++N Q  PL   +  G  V I+ +K  +P   WLNF +TGKARA IR+ L++ + DE IA
Sbjct: 422 KINGQVVPLRTEIQQGDQVAILRSKAQRPQDNWLNFAITGKARAAIRRHLRHKELDETIA 481

Query: 486 LGRRLLNHALGENKLDSVAPELLDKVIQETKHKDLNSLLADIGLGNAMSIVIAQRL---- 541
           LGR+L +  +    +  +  E L   +   K  D ++L+  I       + + + L    
Sbjct: 482 LGRKLYDDIVRRLPV-PIGEEALGAALTRLKLDDADALMEAIARRKLSDVQVMEALMPGS 540

Query: 542 TGGAVPEKQSETHLMPIRG-AEGMLVSFAKCCHPIPGDAVIAHVSPGKGLVVHMENCANI 600
           T G +    +    + I+G   G+  + A CCHPIPGD ++    PG+ + +H  +C  +
Sbjct: 541 TEGDLAPLPATRDPISIKGLTPGVAFTLAPCCHPIPGDRIVGVRQPGEPIEIHQISCPKL 600

Query: 601 RGYQGEPDKYIPVHW-DKVDGVEYQANLRVEIVNHQGALAKITSIIASEGSNIHNLSTEE 659
                E   +I + W DK +G    A + V + N  GAL  + +++    +NI N+  + 
Sbjct: 601 DNV--EDKDWIDIGWGDKAEG--GTARIAVTVKNEPGALGAVATLLGQHKANILNIRFDT 656

Query: 660 RDGRVYLINLRISVRDRIHLANVMRRIRVLPEVLRTSR 697
           RD   +   + + VRD  HL  ++  +R    V    R
Sbjct: 657 RDTTFHTNMIDLEVRDAAHLMKLIGALRAADAVSSAER 694