Pairwise Alignments

Query, 365 a.a., tRNA (uracil-5-)-methyltransferase (RefSeq) from Shewanella amazonensis SB2B

Subject, 456 a.a., 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 from Pseudomonas fluorescens FW300-N2E2

 Score = 77.4 bits (189), Expect = 7e-19
 Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 15/175 (8%)

Query: 187 FTQPNAGVAVKMLEWALD-ATKQSSGDLLELYCGNGNFSIALAPNFGKVLATELAKPSVE 245
           F Q NAGV   M+  AL     ++   +L+L+CG GNF++ LA +  +V+A E  +  V+
Sbjct: 281 FIQVNAGVNEAMIAQALQWLAPRAEERVLDLFCGLGNFALPLAQSVRQVVAVEGVQTMVD 340

Query: 246 AAQYNIQVNKVSNLDIVRMSAEEFTEAMKGEKRFNRLGDIDLQSYQCNTIFVDPPRAGLD 305
            A  N   N ++N    +    +             L D +      + + +DPPR G  
Sbjct: 341 RAAANAVSNNLNNTAFFQADLSQ------------PLADAEWIGEGFSAVLLDPPRDGAF 388

Query: 306 DETVKLVQ-GYENILYISCNPDTL-NDNLKVLSETHEVVRFALFDQFPYTHHTEA 358
           +   KL   G + ++Y+SCNP TL  D ++++ + + + R  + D FP T H EA
Sbjct: 389 EVVRKLSSLGAKRLVYVSCNPATLARDTVELIKQGYRLKRAGILDMFPQTAHVEA 443