Pairwise Alignments

Query, 365 a.a., tRNA (uracil-5-)-methyltransferase (RefSeq) from Shewanella amazonensis SB2B

Subject, 359 a.a., tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) from Pseudomonas fluorescens FW300-N2E2

 Score =  340 bits (872), Expect = 3e-98
 Identities = 175/360 (48%), Positives = 237/360 (65%), Gaps = 5/360 (1%)

Query: 7   DPQQYEQQLEQKCQALTEAFAHYNPPALEVFPSAPAHYRMRCEFRVWHDGDDLYYCMFDN 66
           D   Y  QL+ K   L +  A ++ P   VF S   H+R+R EFR+W +  + +Y MF  
Sbjct: 4   DSHAYTAQLQDKVTRLRDLLAPFDAPEPAVFDSPLEHFRLRAEFRLWREAGERHYAMFSQ 63

Query: 67  VAKEK-VRTDQFLPASELINRMMPALLDELRPNRALRHKLFQVDFLSTLSGEILVSLLYH 125
             K   +  +QF  AS  IN++MP L    + +  L HKLFQV+FL+TL+G+ +++L YH
Sbjct: 64  DDKRTPILIEQFPIASLRINQLMPQLKAAWQASAPLSHKLFQVEFLTTLAGDAMITLCYH 123

Query: 126 RQLDDQWLTEARALKARLGEHFKVDIIGRARKQKFVLDRDFVVESLDVDGKTLHYKQVEN 185
           R LD+ W T A  L + LG    V IIGR++ ++ V+  D+VVE L+V G+T  Y+Q E 
Sbjct: 124 RPLDEHWHTAASKLASDLG----VSIIGRSKGKREVIGHDYVVEKLEVGGRTFSYRQPEG 179

Query: 186 SFTQPNAGVAVKMLEWALDATKQSSGDLLELYCGNGNFSIALAPNFGKVLATELAKPSVE 245
           +FTQPN  V  KML WA DA    S DLLELYCGNGNF++ LA    KVLATE++K SV 
Sbjct: 180 AFTQPNGTVNQKMLNWAYDALGDRSDDLLELYCGNGNFTLPLATRVRKVLATEISKTSVN 239

Query: 246 AAQYNIQVNKVSNLDIVRMSAEEFTEAMKGEKRFNRLGDIDLQSYQCNTIFVDPPRAGLD 305
           AA  N+  N V N+ +VR+SAEE TEA+   + F RL  IDL+SY+  ++FVDPPRAG+D
Sbjct: 240 AALSNLSENAVDNVTLVRLSAEELTEALNEVRPFRRLHGIDLKSYEFGSVFVDPPRAGMD 299

Query: 306 DETVKLVQGYENILYISCNPDTLNDNLKVLSETHEVVRFALFDQFPYTHHTEAGVMLKRR 365
            +T +L + ++NILYISCNP+TL  N+  L +TH + R ALFDQFP+THH E+GV+L RR
Sbjct: 300 PDTCELTRRFDNILYISCNPETLAANIAQLHDTHRITRCALFDQFPWTHHMESGVLLTRR 359