Pairwise Alignments

Query, 365 a.a., tRNA (uracil-5-)-methyltransferase (RefSeq) from Shewanella amazonensis SB2B

Subject, 380 a.a., tRNA (uracil-5-)-methyltransferase from Pseudomonas stutzeri RCH2

 Score =  355 bits (912), Expect = e-103
 Identities = 179/361 (49%), Positives = 241/361 (66%), Gaps = 5/361 (1%)

Query: 6   MDPQQYEQQLEQKCQALTEAFAHYNPPALEVFPSAPAHYRMRCEFRVWHDGDDLYYCMFD 65
           +DP QYE QL +K   L E  A ++ PA EVF S   HYR+R EFR+W +    +Y MF+
Sbjct: 24  LDPAQYETQLAEKAARLVELLAPFDAPAPEVFDSPREHYRLRTEFRLWREDGQRHYAMFE 83

Query: 66  NVAKEK-VRTDQFLPASELINRMMPALLDELRPNRALRHKLFQVDFLSTLSGEILVSLLY 124
              K K +  D F  AS  IN +MP L    + +  L  KLFQV+FL+TL+G+ L++L Y
Sbjct: 84  QGDKHKAILIDDFPIASRRINELMPQLKAAWQASEVLSFKLFQVEFLTTLAGDALITLAY 143

Query: 125 HRQLDDQWLTEARALKARLGEHFKVDIIGRARKQKFVLDRDFVVESLDVDGKTLHYKQVE 184
           HR LD+ W  EA  L A LG    V ++GR++ ++ V+ RD+V E+L V G+T  Y+Q E
Sbjct: 144 HRPLDEAWQAEAEQLAANLG----VSLVGRSKGKRIVIGRDYVEEALVVAGRTFRYRQPE 199

Query: 185 NSFTQPNAGVAVKMLEWALDATKQSSGDLLELYCGNGNFSIALAPNFGKVLATELAKPSV 244
            +FTQPN  V  KML WA +A  +   DLLELYCGNGNF++ LA    +VLATE++K SV
Sbjct: 200 GAFTQPNGEVCQKMLNWAFEALGERDDDLLELYCGNGNFTLPLATRVRRVLATEISKTSV 259

Query: 245 EAAQYNIQVNKVSNLDIVRMSAEEFTEAMKGEKRFNRLGDIDLQSYQCNTIFVDPPRAGL 304
            AA  NI    + N+++VR+SAEE T+A+   + F RL DIDL+SY   ++FVDPPRAG+
Sbjct: 260 NAALANIADTGIDNIELVRLSAEELTQALNEVRPFRRLADIDLKSYDFGSVFVDPPRAGM 319

Query: 305 DDETVKLVQGYENILYISCNPDTLNDNLKVLSETHEVVRFALFDQFPYTHHTEAGVMLKR 364
           D +T +L + +E ILYISCNP+TL  N+  L++TH + R ALFDQFPYTHH E+GV+L R
Sbjct: 320 DPDTCELTRRFERILYISCNPETLAQNIAQLADTHRIERCALFDQFPYTHHMESGVLLVR 379

Query: 365 R 365
           R
Sbjct: 380 R 380