Pairwise Alignments

Query, 350 a.a., glycosyl transferase family protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 352 a.a., lipopolysaccharide biosynthesis protein from Marinobacter adhaerens HP15

 Score =  296 bits (757), Expect = 7e-85
 Identities = 157/342 (45%), Positives = 216/342 (63%), Gaps = 5/342 (1%)

Query: 8   MKSLCLLRLSAIGDVCHAVAMVQAIQRRYPDLAVTWVIGKVEYQLLKHLPGIEFVIFDKS 67
           M S+C+LRLSAIGDV H + +V ++Q + P + +TWVIGK+E +L+  LPG+EF+IFDK 
Sbjct: 1   MNSICILRLSAIGDVTHVIPVVLSLQEQLPGVKITWVIGKIEAKLVGDLPGVEFIIFDKK 60

Query: 68  QGFKAYGQLCRALKGRHFDVLLHMQVALRATIASLMIPAKVRIGFDRARAKEGQWLVTNE 127
            G K Y +L R + GR FD LLHMQVA RA +A++ IPA+VRIG+D+AR+K+   L  N 
Sbjct: 61  AGRKGYAELRRQMSGRKFDALLHMQVAFRANLAAVCIPARVRIGYDKARSKDLHSLFINH 120

Query: 128 RVEAMATPHVLEGFMGFARKLGVTELPPSWDMHIPAADEVFAKELVADGEKVLAICAAAS 187
           R++     HV +    F   L +   PP W + +  +D  FA+E +A+  K L I   AS
Sbjct: 121 RIKPAPKQHVRDCLASFLEPLDLKAAPPRWQIPLNDSDHEFAREQLANDRKNLVISPCAS 180

Query: 188 KAERNWLPERYAAVADYAVSK-GYRVLLCGGPAQLEKDLAAAIEANCSSKLTNLVGKTSL 246
              RNW  ERYA +AD+A+ K G +V+L G PA  E +  AAIEA    K  N+ GK +L
Sbjct: 181 HTLRNWPAERYAQLADHAIQKHGMKVILVGSPAPSEAEYCAAIEAAMKEKAHNICGKDTL 240

Query: 247 IQLLALLKRVSLVIAPDTGPAHMAVTQGTPVIGLYAHSNPGRTGPYFSRELTVSVYDQVI 306
            QL AL+    LV+APDTGPAH+A   GT V+GL+A SNP R+GPY S +  V+ Y + +
Sbjct: 241 KQLTALMTHADLVVAPDTGPAHIASAVGTDVLGLFAASNPYRSGPYNSLDWCVNRYPEAL 300

Query: 307 AEQYPN---QQIPWGTRAKGDTLMEKIEVADVCRMFDRATDV 345
            E++     +Q  WG +A+ +  ME I VAD   M DR  +V
Sbjct: 301 -EKFTGKTVEQARWGAKAEFEGAMELITVADATNMLDRWVEV 341