Pairwise Alignments

Query, 480 a.a., potassium uptake protein TrkH (RefSeq) from Shewanella amazonensis SB2B

Subject, 485 a.a., TrkH family potassium uptake protein (RefSeq) from Shewanella loihica PV-4

 Score =  289 bits (740), Expect = 1e-82
 Identities = 173/487 (35%), Positives = 269/487 (55%), Gaps = 14/487 (2%)

Query: 2   LNLRPLLFILGTFLSMLAGFMLIPLLFALLHGDETSGAFMISSLATGAAASFCISSGQQK 61
           +  R ++ I G  + + +  +L P L A+++ D    AF+ +   +           ++ 
Sbjct: 1   MQYRTIIRITGLLMGLFSLSLLPPALVAVIYKDGGGTAFLQAFFLSLLLGFVLWYPNRRH 60

Query: 62  NIKLNIRDMFLLTSITWLVVSLFAAMPFTLYH--GINYTDAFFETMSGITTTGSTVLSGL 119
              L  R+ F+L  + W V+    A+PF       ++ TD+FFE+ S +TTTG+TVL GL
Sbjct: 61  KKDLRTREGFMLVVLFWGVLGSIGAVPFIFSSQPDLSLTDSFFESFSALTTTGATVLVGL 120

Query: 120 DSMDRSILIWRSLLQWLGGIGFIVMAVAVLPFLNVGGMRLFRTE--SSDWSDKSTPRTQD 177
           DS+ ++IL +R LLQWLGG+G IV+AVA+LP L +GGM+L+R E        K TPR  +
Sbjct: 121 DSLPKAILFYRHLLQWLGGMGIIVLAVAILPVLGIGGMQLYRAEIPGPVKDSKMTPRIAE 180

Query: 178 MAKNLFLVYILLTILCGLGYHLAGMDWFEAINHAMTTLSTGGYSTSDESMAHF-SPAAHW 236
            AK L+ +Y+ LTI C   Y +AGMD F+AI H+ +T++ GG+ST D SM +F S A + 
Sbjct: 181 TAKALWYIYLALTIACAFAYWVAGMDVFDAICHSFSTIAIGGFSTHDASMGYFDSTAINM 240

Query: 237 VGTSFMLAGGLPLLIFVQML--RGRSLTVW-NDAQVKGFLLF-VALVSVAL-SFWLADVK 291
           V   F+L   L   +       RG +L V+  DA+ K  ++  +AL  +   + +   + 
Sbjct: 241 VCVVFLLIAALNFSLHFAAFTRRGINLKVYLRDAEFKALIVIQLALTLICFATLYHTGIY 300

Query: 292 DLAFMDALRLTSFNVVSVVTTTGYGLTDYGSWGPLANVAFLFLMFVGACSGSTSGGIKIF 351
           D A  +      F  VS+ TT G+G   +  W     +  +F  F+G C GST+GGIK+ 
Sbjct: 301 DSA-EETFDFALFQAVSISTTAGFGTESFHMWPLFLPMLLIFSSFIGGCGGSTAGGIKVM 359

Query: 352 RFQIAGAIMREQLKQQIHPAGIFRERYNNRPISEDIIRSLVTFILLFMGVTVALAVFLVA 411
           R  +       +LK+ +HP G+F  R N + + + II ++  F   +  V V   + L+A
Sbjct: 360 RMILLLLQGSRELKRLVHPRGMFSIRINGKALPDRIIDAVWGFFSAYALVFVVCMLILMA 419

Query: 412 VGVDPMSSLTGAITAVTNVGPGLGPVIGPAGNFASLPDSAKWALSLGMLLGRLEILTVAV 471
           +G+D +++ +     + N+GPGLG V   A N+AS+ D  KW L + ML GRLE+ T+ V
Sbjct: 420 LGMDNITAFSATAACLNNLGPGLGEV---ASNYASIGDGEKWVLVVAMLFGRLEVFTLLV 476

Query: 472 LFHPKFW 478
           LF P FW
Sbjct: 477 LFTPTFW 483