Pairwise Alignments

Query, 480 a.a., potassium uptake protein TrkH (RefSeq) from Shewanella amazonensis SB2B

Subject, 491 a.a., cation transporter (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  140 bits (353), Expect = 1e-37
 Identities = 110/390 (28%), Positives = 189/390 (48%), Gaps = 19/390 (4%)

Query: 94  GINYTDAFFETMSGITTTGSTVLSGLDSMDRSILIWRSLLQWLGGIGFIVMAVAVLPFLN 153
           G+   DA FE +SG TTTG +V    D+   +    R+ +QW GG+   VMA AVL  L 
Sbjct: 110 GMPVVDALFEAVSGATTTGLSVAFNPDAWPFAGHFLRAWVQWCGGL---VMATAVLAMLL 166

Query: 154 VGGM--RLFRTESSDWSDKSTPRTQDMAKNLFLVYILLTILCGLGYHLAGMDWFEAINHA 211
             G+  R       D  D+    T+  A+ L   Y  LT +  L       DW EA+   
Sbjct: 167 PSGLPARKLGQAGIDQGDRIAS-TRKQARQLLTAYAALTGIMTLATMATIPDWREALAVT 225

Query: 212 MTTLSTGGYSTSDESMAHFSPAAHWVGTSFMLAGGLPLLIFVQMLRGRSLTVWNDAQVKG 271
           ++ +ST G++   +S+A ++P A  +     + G + LL FV + +G+    W    ++ 
Sbjct: 226 LSAVSTAGFAPRSDSLASYAPLAQGMVMLSCVLGAVSLLSFVLLSQGKWRQAWRLGSLRR 285

Query: 272 FLLFVALVSVALSFWL--ADVKDLAFMDALRLTSFNVVSVVTTTGYGLTDYGSWGPLANV 329
             L V L   AL  +L  A  +D     A+  ++ N++S +TT G+        GP+  +
Sbjct: 286 VGLTVILFVAALIAFLVAAGERDAG---AIYSSALNLISGLTTAGFSTGPISDLGPVL-L 341

Query: 330 AFLFLMFVGACSGSTSGGIKIFRFQ-IAGAIMREQLKQQIHPAGIFRERYNNRPISEDII 388
             +  M +G   GST+GG+K+ R   I GAI+    + ++    +   R N  P++ + +
Sbjct: 342 LIVVAMVLGGDVGSTAGGLKLARVAVIVGAILHAGQRLRLPRNAVAPLRQNGEPVAPETL 401

Query: 389 RSLVTFILLFMGVTVALAVFLVAVGVDPMSSLTGAITAVTNVGPGLGPVIGPAGNFASLP 448
            S++  + +++G  + L + ++A G D + +L  A + ++ VG   G + GP     S+ 
Sbjct: 402 VSILGLLGIYLGALMLLWLHILAHGHDALGALFEATSTLSTVGLSTG-ITGP-----SMS 455

Query: 449 DSAKWALSLGMLLGRLEILTVAVLFHPKFW 478
              K +++  M LGR+E   V +L  P+ W
Sbjct: 456 VDLKLSMTFAMWLGRVEFFAVLLLLAPRTW 485



 Score = 32.0 bits (71), Expect = 5e-05
 Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 20/153 (13%)

Query: 15  LSMLAGFMLIPLLFALLHGD--ETSGAFMISSLATGAAASFCISSGQQKNIKLN------ 66
           +S L   +L+ ++  +L GD   T+G   ++ +A    A   + +GQ+  +  N      
Sbjct: 333 ISDLGPVLLLIVVAMVLGGDVGSTAGGLKLARVAVIVGA--ILHAGQRLRLPRNAVAPLR 390

Query: 67  -----IRDMFLLTSITWLVVSLFAAMPFTLY---HGINYTDAFFETMSGITTTG-STVLS 117
                +    L++ +  L + L A M   L+   HG +   A FE  S ++T G ST ++
Sbjct: 391 QNGEPVAPETLVSILGLLGIYLGALMLLWLHILAHGHDALGALFEATSTLSTVGLSTGIT 450

Query: 118 GLDSMDRSILIWRSLLQWLGGIGFIVMAVAVLP 150
           G  SM   + +  +   WLG + F  + + + P
Sbjct: 451 G-PSMSVDLKLSMTFAMWLGRVEFFAVLLLLAP 482



 Score = 26.6 bits (57), Expect = 0.002
 Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 2/53 (3%)

Query: 381 RPISEDI--IRSLVTFILLFMGVTVALAVFLVAVGVDPMSSLTGAITAVTNVG 431
           RP+ +D+  + ++VT  L+F    V +    +A+G+  + +L  A++  T  G
Sbjct: 76  RPLPDDLRGVEAIVTIALVFGMSAVFVTPAFMALGMPVVDALFEAVSGATTTG 128