Pairwise Alignments

Query, 360 a.a., recombination protein F (RefSeq) from Shewanella amazonensis SB2B

Subject, 367 a.a., recombinase RecF from Pseudomonas fluorescens FW300-N2C3

 Score =  299 bits (766), Expect = 7e-86
 Identities = 159/362 (43%), Positives = 220/362 (60%), Gaps = 3/362 (0%)

Query: 1   MSLSRLSIDAFRNIDSAQLAPGAGLNLIYGHNGSGKTSILEAIYFLGMGRSFRSHLSQRV 60
           MSLSR+S+ A RN+     +P   +N++YG NGSGKTS+LEA++ LG+ RSFRS     V
Sbjct: 1   MSLSRVSVTAVRNLHPVTFSPSPRINILYGANGSGKTSVLEAVHLLGLARSFRSTRLLPV 60

Query: 61  IQNDADCLTLFAVAE-GQAGDSRIGLRRHRSGDTEVKIDGEKVKRLSQLAEALPIQVITP 119
           IQ D    T+F   E  + G S +G+ R R G+ +++IDG+  +  +QLAE LP+Q+I P
Sbjct: 61  IQYDQLACTVFGQVELAEGGHSALGISRDRQGEFQIRIDGQNARSAAQLAEILPLQLINP 120

Query: 120 ESFSLLFEGPSARRQFIDWGAFHASKQFHLAWMNTRRILKQRNQLLRDGA-SYEHIAFWD 178
           +SF LL   P  RRQF+DWG FH   +F   W   ++ L+QRN  LR G       A WD
Sbjct: 121 DSFRLLEGAPKIRRQFLDWGVFHVEPRFMTTWQRLQKALRQRNSWLRHGTLDAVSQAVWD 180

Query: 179 KELIRYALEVTAIRNDYVGSLNGVLKGIIGEFLPDVDIRVSFTRGWDSKTDFSELLQSQY 238
           +EL + + E+   R  Y+ +L  V +  + E +    + +S+ RGWD   + S +L    
Sbjct: 181 RELCQASAEIDEYRRAYIKALKPVFEQTLSELVELEGLTLSYYRGWDKDRELSTVLAGSL 240

Query: 239 ARDLAIGHTVSGPHKADLRLRVGNLPAQDALSRGQLKLLVCALRIAQGKLLKQQIDKHSI 298
            RD  +GHT +GP +ADLRLR+G   A D LSRGQ KL+VCALRIAQG L+ Q      I
Sbjct: 241 QRDQQMGHTQAGPQRADLRLRLGAHNAADILSRGQQKLVVCALRIAQGHLVSQARRGQCI 300

Query: 299 YLVDDLPSELDAKHRQLLLKELIDTGAQLFVTAIEPSAIVDSLPV-PPDRMFHVQAGRVT 357
           YLVDDLPSELD  HR+ L + L D   Q+F+T ++   + +      P  +FHV+ GR+T
Sbjct: 301 YLVDDLPSELDEAHRRALCRLLEDLRCQVFITCVDHELLREGWQTETPVALFHVEQGRIT 360

Query: 358 QT 359
           QT
Sbjct: 361 QT 362