Pairwise Alignments

Query, 360 a.a., recombination protein F (RefSeq) from Shewanella amazonensis SB2B

Subject, 369 a.a., DNA replication/repair protein RecF from Pseudomonas aeruginosa PA14

 Score =  302 bits (774), Expect = 8e-87
 Identities = 163/364 (44%), Positives = 225/364 (61%), Gaps = 7/364 (1%)

Query: 1   MSLSRLSIDAFRNIDSAQLAPGAGLNLIYGHNGSGKTSILEAIYFLGMGRSFRSHLSQRV 60
           MSL+R+S+ A RN+    L+P   +N++YG NGSGKTS+LEAI+ LG+ RSFRS   Q V
Sbjct: 1   MSLTRVSVTAVRNLHPVTLSPSPRINILYGDNGSGKTSVLEAIHLLGLARSFRSARLQPV 60

Query: 61  IQNDADCLTLFA---VAEGQAGDSRIGLRRHRSGDTEVKIDGEKVKRLSQLAEALPIQVI 117
           IQ +    T+F    +A G A  S +G+ R R G+  ++IDG+  +  +QLAE LP+Q+I
Sbjct: 61  IQYEEAACTVFGQVMLANGIA--SNLGISRERQGEFTIRIDGQNARSAAQLAETLPLQLI 118

Query: 118 TPESFSLLFEGPSARRQFIDWGAFHASKQFHLAWMNTRRILKQRNQLLRDGA-SYEHIAF 176
            P+SF LL   P  RRQF+DWG FH   +F   W   ++ L+QRN  LR G       A 
Sbjct: 119 NPDSFRLLEGAPKIRRQFLDWGVFHVEPRFLPVWQRLQKALRQRNSWLRHGKLDPASQAA 178

Query: 177 WDKELIRYALEVTAIRNDYVGSLNGVLKGIIGEFLPDVDIRVSFTRGWDSKTDFSELLQS 236
           WD+EL   + E+ A R  Y+ +L  V +  + E +   D+ +S+ RGWD   D  E+L S
Sbjct: 179 WDRELSLASDEIDAYRRSYIQALKPVFEETLAELVSLDDLTLSYYRGWDKDRDLLEVLAS 238

Query: 237 QYARDLAIGHTVSGPHKADLRLRVGNLPAQDALSRGQLKLLVCALRIAQGKLLKQQIDKH 296
              RD  +GHT +GP +ADLR+R+    A + LSRGQ KL+VCALRIAQG L+ +     
Sbjct: 239 SLLRDQQMGHTQAGPQRADLRIRLAGHNAAEILSRGQQKLVVCALRIAQGHLINRAKRGQ 298

Query: 297 SIYLVDDLPSELDAKHRQLLLKELIDTGAQLFVTAIEPSAIVDSLPV-PPDRMFHVQAGR 355
            +YLVDDLPSELD +HR  L + L D G Q+F+T ++P  + D      P  MFHV+ G+
Sbjct: 299 CVYLVDDLPSELDEQHRMALCRLLEDLGCQVFITCVDPQLLKDGWRTDTPVSMFHVEHGK 358

Query: 356 VTQT 359
           V+QT
Sbjct: 359 VSQT 362