Pairwise Alignments

Query, 360 a.a., recombination protein F (RefSeq) from Shewanella amazonensis SB2B

Subject, 366 a.a., DNA replication/repair protein RecF from Lysobacter sp. OAE881

 Score =  201 bits (512), Expect = 2e-56
 Identities = 126/369 (34%), Positives = 188/369 (50%), Gaps = 14/369 (3%)

Query: 1   MSLSRLSIDAFRNIDSAQLAPGAGLNLIYGHNGSGKTSILEAIYFLGMGRSFRSHLSQRV 60
           M ++RL +   R     +L P  GLNLI G NG+GKT++LEA++ +  GRSFR  +   +
Sbjct: 1   MHVTRLELRHLRRFQDLRLDPAPGLNLITGDNGAGKTTVLEALHLMAYGRSFRGRVRDGL 60

Query: 61  IQNDADCLTLFAVAEGQAGDS-------RIGLRRHRSGDTEVKIDGEKVKRLSQLAEALP 113
           I+     L +F   + +AG S       + GLR H   D   ++DG  V +L  L  AL 
Sbjct: 61  IRAGDAGLEVFVEWQERAGRSGDDERLRKAGLR-HTGQDWTGRLDGANVAQLGDLCAALA 119

Query: 114 IQVITPESFSLLFEGPSARRQFIDWGAFHASKQFHLAWMNTRRILKQRNQLLRDGASYEH 173
           +    P S +L+  G  +RR+++DWG FH    F   W    R LKQRN LL+  A    
Sbjct: 120 VVTFEPGSHALITGGGESRRRYLDWGLFHVEPDFLPVWRRYSRALKQRNALLKVRARDAQ 179

Query: 174 IAFWDKELIRYALEVTAIRNDYVGSLNGVLKGIIGEFLPDVDI-RVSFTRGWD-SKTDFS 231
           +  WD EL      ++  R  Y+  L    + ++ +  P + + R+ +  GW   +   +
Sbjct: 180 LDAWDHELAEAGEPLSRFRERYLDLLQVRFEPLLSDLAPALGLSRLEYAPGWRRDEMSLA 239

Query: 232 ELLQSQYARDLAIGHTVSGPHKADLRLRVGNLPAQDALSRGQLKLLVCALRIAQGKLLKQ 291
           +       RDL  G+T  GPH+AD R+   NLP ++ALSRGQ KL   A  +AQ +   +
Sbjct: 240 DAFLLSRERDLVAGYTGVGPHRADWRVVFANLPGREALSRGQSKLTALAALLAQAEHHDE 299

Query: 292 QIDKHSIYLVDDLPSELDAKHRQLLLKELIDTGAQLFVTAIE-PSAIVDSLPVPPDRMFH 350
              +  +  +DDL SELD  H+  +L  L  +GAQ+F+T  E P  +    PV     FH
Sbjct: 300 THGEWPVVALDDLASELDRHHQGRVLARLQSSGAQVFITGTEAPPGVPTDFPV---HRFH 356

Query: 351 VQAGRVTQT 359
           V+ G +T T
Sbjct: 357 VEHGAITTT 365