Pairwise Alignments

Query, 541 a.a., inner membrane protein, 60 kDa (RefSeq) from Shewanella amazonensis SB2B

Subject, 541 a.a., membrane protein insertase YidC from Vibrio cholerae E7946 ATCC 55056

 Score =  563 bits (1451), Expect = e-165
 Identities = 289/543 (53%), Positives = 372/543 (68%), Gaps = 8/543 (1%)

Query: 1   MESQRNLLLIGLLFVSFLLWQQWESDKAPKPATEVTAAAQIHDQAINSDVPTADAGVPA- 59
           M+SQRN+LLI L  VSFLL+QQW+  K P P  + T  AQ    A            PA 
Sbjct: 1   MDSQRNILLIALALVSFLLFQQWQVAKNPAP--QATQQAQSTGAAPAPSFSDELDPTPAQ 58

Query: 60  TVAATQNLILVTTDQLEIQINPVGGDIVHAALLTHKLEQNEEAPFVLLEQKNNFSYIAQS 119
            VAA    I V+TD L + I+ +GGD+V A L  +  E N    FVLL+      +IAQS
Sbjct: 59  NVAAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQGHQFIAQS 118

Query: 120 GLIGRDGIDSAASGRAKFAAAADAYTLADGQDTLEVPLTLTTDAGVTFTKVFVFKRGQFD 179
           GL+G  GID  ++ R  +  +AD++TLA+GQD L +P+T   + G+ +TK F+ KRG + 
Sbjct: 119 GLVGPQGIDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQAN-GIDYTKTFILKRGSYA 177

Query: 180 VGVDYRVANNSAAPVQVQMYGQIKQTITASESSMMMPTYRGAAFSTADVRYEKYSFDDMG 239
           V V + VANNS +   + MY  ++Q +  S  ++ MPTYRG A+ST+DVRY+KYSFDDM 
Sbjct: 178 VDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPTYRGGAYSTSDVRYKKYSFDDMK 237

Query: 240 KKDLEEPT--LGGWVAMLQHYFVSAWVPAAADKNTLFTSVSAGGLANIGFKGSVHDVAPG 297
            ++L  P      WVAM+QHYF SAW+P    +  L++ V    L ++G +     +A G
Sbjct: 238 DRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRV-INNLGDMGIRTPNKTIANG 296

Query: 298 ATETISATFYVGPKDQAALSALSDTLNLVVDYGFLWWLAVPIHWILMFFQSLVHNWGVAI 357
                 AT +VGPK Q  ++A +  L+LVVDYG+LW++A P+HW+L   Q+ V NWGVAI
Sbjct: 297 DKAEFEATLWVGPKLQDQMAATAPNLDLVVDYGWLWFIAKPLHWLLSVIQTFVGNWGVAI 356

Query: 358 ILVTLTVRGLLYPLTKAQYVSMAKMRNLQPKLQDLKDRFGDDRQKMGQAMMELYKKEKVN 417
           I +T  VRG +YPLTKAQY SMAKMR LQPKLQ +++R GDDRQ+M Q MMELYKKEKVN
Sbjct: 357 ICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVN 416

Query: 418 PMGGCLPILLQMPIFIALYWVLLESVELRHAPFMLWIQDLSVQDPYYVLPLLMGASMWAM 477
           P+GGCLPILLQMPIFIALYW L+ESVELRH+PF  WI DLS QDPYY+LPLLMGASM+ +
Sbjct: 417 PLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYYILPLLMGASMFVI 476

Query: 478 QKMQPMAPNMDPMQQKMLQWMPMIFTVFFLWFPAGLVLYWLVGNLVAITQQKIIYASLEK 537
           QKM P     DPMQQK++ +MP++FT FFLWFP+GLVLYWLV N+V + QQ +IY +LEK
Sbjct: 477 QKMSPTTIT-DPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYKALEK 535

Query: 538 KGL 540
           KGL
Sbjct: 536 KGL 538