Pairwise Alignments

Query, 541 a.a., inner membrane protein, 60 kDa (RefSeq) from Shewanella amazonensis SB2B

Subject, 544 a.a., membrane protein insertase YidC from Rahnella sp. WP5

 Score =  557 bits (1435), Expect = e-163
 Identities = 277/549 (50%), Positives = 383/549 (69%), Gaps = 22/549 (4%)

Query: 1   MESQRNLLLIGLLFVSFLLWQQWESDKAPKPATEVT--AAAQIHDQAINSDVPTADAGVP 58
           M+SQRNL LI LLFVSF++WQ W++D AP+PA + T   A   +  A N  VP +  G  
Sbjct: 1   MDSQRNLFLIALLFVSFMIWQAWQTDHAPQPANQTTQQTANTANGDATNQAVPDSGQG-- 58

Query: 59  ATVAATQNLILVTTDQLEIQINPVGGDIVHAALLTHKLEQNEEAPFVLLEQKNNFSYIAQ 118
                   LI V +D L + IN  GGDI  A L  +      + PF LLE   NF Y AQ
Sbjct: 59  -------KLITVNSDVLSLTINTRGGDIEQALLKAYPTTLGSDQPFQLLETTPNFLYQAQ 111

Query: 119 SGLIGRDGIDSAASG-RAKFAAAADAYTLADGQDTLEVPLTLTTDAGVTFTKVFVFKRGQ 177
           SGL G++G D+ A+G R  F A++D +T+A+GQ  L +P+T T   G  +TK FV KRG 
Sbjct: 112 SGLTGKNGPDNPANGERPLFKASSDTFTMAEGQSELRIPMTYTAANGAIYTKTFVIKRGS 171

Query: 178 FDVGVDYRVANNSAAPVQVQMYGQIKQTIT------ASESSMMMPTYRGAAFSTADVRYE 231
           + V V+Y + N + AP+++ M+GQ+KQT           ++  + T+RGAA+S++D +Y+
Sbjct: 172 YAVNVEYNINNTTPAPLELTMFGQLKQTTELPKHRDTGSNNFALHTFRGAAYSSSDDKYQ 231

Query: 232 KYSFDDMGKKDLEEPTLGGWVAMLQHYFVSAWVPAAADKNTLFTSVSAGGLANIGFKGSV 291
           KY+FD    + L   T GGWVAMLQ YF +AW+P+A D NT FT+ +  G++ IGFKG+ 
Sbjct: 232 KYAFDK--SEALNVTTQGGWVAMLQQYFATAWIPSAKDTNTFFTTTN-NGISTIGFKGTP 288

Query: 292 HDVAPGATETISATFYVGPKDQAALSALSDTLNLVVDYGFLWWLAVPIHWILMFFQSLVH 351
             VAPGA + +++  +VGP+ Q  ++A++  L+L VDYG+LW+++ P+  +L F Q  V 
Sbjct: 289 FTVAPGAQQQVASILWVGPEIQDKMAAIAPHLDLTVDYGWLWFISQPLFKLLKFIQGFVG 348

Query: 352 NWGVAIILVTLTVRGLLYPLTKAQYVSMAKMRNLQPKLQDLKDRFGDDRQKMGQAMMELY 411
           NWG +II++T  VRG++YPLT+AQY SMAKMR LQPKL  +++R GDD+Q+M Q MM LY
Sbjct: 349 NWGFSIIVITFIVRGIMYPLTRAQYTSMAKMRMLQPKLAAMRERIGDDKQRMSQEMMALY 408

Query: 412 KKEKVNPMGGCLPILLQMPIFIALYWVLLESVELRHAPFMLWIQDLSVQDPYYVLPLLMG 471
           K EKVNP+GGCLP+++QMPIF+ALY++L  S+ELRHAPF+LWI DLS QDPYY+LP+LMG
Sbjct: 409 KSEKVNPLGGCLPLVIQMPIFLALYYMLSGSIELRHAPFILWIHDLSAQDPYYILPVLMG 468

Query: 472 ASMWAMQKMQPMAPNMDPMQQKMLQWMPMIFTVFFLWFPAGLVLYWLVGNLVAITQQKII 531
            +M+ +QKM P     DPMQQK++ +MP+IFTVFFLWFP+GLV+Y++V NLV I QQ++I
Sbjct: 469 ITMFFIQKMSPTTVT-DPMQQKIMTFMPVIFTVFFLWFPSGLVVYYIVSNLVTILQQQLI 527

Query: 532 YASLEKKGL 540
           Y  LEK+GL
Sbjct: 528 YRGLEKRGL 536