Pairwise Alignments

Query, 541 a.a., inner membrane protein, 60 kDa (RefSeq) from Shewanella amazonensis SB2B

Subject, 539 a.a., 60 kDa inner membrane insertion protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  255 bits (651), Expect = 3e-72
 Identities = 185/546 (33%), Positives = 278/546 (50%), Gaps = 32/546 (5%)

Query: 1   MESQRNLLLIGLLFVSFLLWQQ------WESDKAPKPATEVTA--AAQIHDQ-AINSDVP 51
           MES+R ++ I L FV  + W        W    AP+   E TA  A+Q   Q A  +  P
Sbjct: 1   MESKRAIIAIALSFVVLVGWSYLADHMGWNGQPAPQAQQEETAPSASQAAPQSASQAAAP 60

Query: 52  TADAGVPATVAATQNLILVTTDQLEIQINPVGGDIVHAALLTHKLEQNEEAPFVLLEQKN 111
              A  P  + +    + V T   +  ++  GG + H +L  ++      AP V +    
Sbjct: 61  APRAETPVFLPSAGREVTVVTPLYKAVLHSGGGVLKHFSLTRYRTAITAGAPAVDMVDTA 120

Query: 112 NFSYIAQSGLIGRDGIDSAASGRAKFAAAADAYTLADGQDTLEVPLTLTTDA-GVTFTKV 170
           + + ++  GL+  +G  S  +G+  F       +L  GQ  +   LT T +  GV   + 
Sbjct: 121 S-TVMSPLGLL-INGQPSWNTGQWSFDGGD--LSLGAGQSGV---LTFTGEVDGVRVVRE 173

Query: 171 FVFKRGQFDVGVDYRVANNSAAPVQVQMYGQIKQTITASESSMMMPTYRGAAFSTADVRY 230
             F    + +    R+A    A  +    G    T   S +       R A         
Sbjct: 174 LTFSADTYLISEKVRLA--PLADARTVRLGFTVGTGNLSPNGGQYDHTRVAWLHDGSFS- 230

Query: 231 EKYSFDDMGKKDLEEPTLGGWVAMLQHYFVSAWVPAAADKNTLFTSVSAGGLANIGFKGS 290
           EK S  D+ K  LE   L  W A++ +YF+ A  P      TL   +  G       +G 
Sbjct: 231 EKTSASDLEKGVLETGALS-WGAVMSNYFLVAAAPVDTTGVTLKGKLQEGVYRVAMERGD 289

Query: 291 VHDVAPGATETISATFYVGPKDQAALSALSDTLNLVVDYGFLWWLAVPIHWILMFFQSLV 350
           V   A G T T++  ++ GPKD+  L    + L   ++ G+   +A P+  +L FF   V
Sbjct: 290 VSIPAGGET-TVACNYWFGPKDRGLLKEAPNQLAEAINLGWFSIIARPLVDMLEFFHKYV 348

Query: 351 HNWGVAIILVTLTVRGLLYPLTKAQYVSMAKMRNLQPKLQDLKDRFGDDRQKMGQAMMEL 410
            N+GVAIIL+T+ ++ + +PL+   Y SM +M+ LQP LQ L+++ GDDR+KM + MM L
Sbjct: 349 GNYGVAIILLTVVIKLVFWPLSHKSYKSMEQMKKLQPMLQKLREKHGDDREKMNEEMMRL 408

Query: 411 YKKEKVNPMGGCLPILLQMPIFIALYWVLLESVELRHAPF--------MLWIQDLSVQDP 462
           YK  KVNP GGCLP+L+Q+P+F  LY  LL ++ELRHA F        M+W+ DLS +DP
Sbjct: 409 YKTYKVNPAGGCLPMLVQIPVFFGLYQALLNAIELRHASFITHLPFTDMVWLADLSAKDP 468

Query: 463 YYVLPLLMGASMWAMQKMQPMAPNMDPMQQKMLQWMPMIFTVFFLWFPAGLVLYWLVGNL 522
           YY+ P++MGA+M   QK+ P AP  DP Q K++ +MP++FT  FL FP+GLV+YWL  N+
Sbjct: 469 YYITPIVMGATMLLQQKLTP-APG-DPTQAKIMMFMPVVFTFMFLSFPSGLVVYWLCNNV 526

Query: 523 VAITQQ 528
           ++I QQ
Sbjct: 527 LSIAQQ 532