Pairwise Alignments

Query, 541 a.a., inner membrane protein, 60 kDa (RefSeq) from Shewanella amazonensis SB2B

Subject, 571 a.a., inner membrane protein translocase component YidC from Marinobacter adhaerens HP15

 Score =  451 bits (1159), Expect = e-131
 Identities = 247/566 (43%), Positives = 340/566 (60%), Gaps = 33/566 (5%)

Query: 1   MESQRNLLLIGLLFVSFLLWQQWESDKAPKPATEVTAAAQIHDQAIN------------- 47
           M+ QR +L  GL  VS+L+   W  D    P T   A +Q    A N             
Sbjct: 1   MDIQRIVLFAGLAIVSYLMVLAWNEDYHQPPETAQVAESQPSQTAGNMGNSDNMVLPEDS 60

Query: 48  -------SDVPTADAG------VPATVAATQNLILVTTDQLEIQINPVGGDIVHAALLTH 94
                   +  T + G         T A +   I V TD  ++QI+ V G++V A LL +
Sbjct: 61  SAQVDGDGEFTTPETGQAVISSTETTTAVSDQFITVRTDVYDLQIDRVSGNLVKARLLDY 120

Query: 95  KLEQNEEAPFVLLEQKNNFSYIAQSGLIGRDGIDSAASGRAK-FAAAADAYTLADGQDTL 153
               N E P  LL    N  Y+ +SGLIGRDG DS  +G A  ++A A +Y LA+G + L
Sbjct: 121 DDTLNSEKPLTLLNNTQNRLYVLESGLIGRDGPDSRKNGSAPVYSADAASYELAEGDNQL 180

Query: 154 EVPLTLTTDAGVTFTKVFVFKRGQFDVGVDYRVANNSAAPVQVQMYGQIKQTIT---ASE 210
           +V LT T+D GV  TK + F+R  +++ V Y V N S+   Q    G+I +  +    S+
Sbjct: 181 QVDLTYTSDNGVQITKRYEFERNSYEISVKYLVENQSSEEWQANFTGKIVRDQSPDPTSQ 240

Query: 211 SSMMMPTYRGAAFSTADVRYEKYSFDDMGKKDLEEPTLGGWVAMLQHYFVSAWVPAAADK 270
           +SM +  + G   S+ +  YEK+ F D+ +  + +    GW+A LQHYF+SAWVP   D 
Sbjct: 241 TSMGIQAFLGLVISSPEDPYEKFDFGDLQENQINQSVTNGWLAFLQHYFLSAWVPER-DI 299

Query: 271 NTLFTSVSAGGLANIGFKGSVHDVAPGATETISATFYVGPKDQAALSALSDTLNLVVDYG 330
              + +   G    +GF      VAPG T  I A  YVGPK    L  ++  L+  VD+G
Sbjct: 300 PAQYQTTRRGPNYVMGFVYPATSVAPGETAEIGARAYVGPKIIERLEGMAPNLDRTVDFG 359

Query: 331 FLWWLAVPIHWILMFFQSLVHNWGVAIILVTLTVRGLLYPLTKAQYVSMAKMRNLQPKLQ 390
           +L+++++P+  IL +F SLV NWGV+IIL+T+ V+ + + L+   Y SMAKMR + P+L 
Sbjct: 360 WLFFISLPLFIILDWFHSLVGNWGVSIILLTVLVKAVFFHLSATSYKSMAKMRAVAPQLT 419

Query: 391 DLKDRFGDDRQKMGQAMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESVELRHAPF 450
            LK+ +GDDRQ+M Q MM LYK+EK+NP+GGCLPIL+QMP+FI+LYWVL ESV+LRHAPF
Sbjct: 420 RLKELYGDDRQRMSQEMMALYKREKINPLGGCLPILVQMPVFISLYWVLFESVQLRHAPF 479

Query: 451 MLWIQDLSVQDPYYVLPLLMGASMWAMQKMQPMAPNMDPMQQKMLQWMPMIFTVFFLWFP 510
           MLWIQDLSV DPY++LP+LMGASM+    + P  P  DPMQ K+++ MP+IFTVFFLWFP
Sbjct: 480 MLWIQDLSVMDPYFILPILMGASMFLQMSLNPTPP--DPMQAKIMKMMPLIFTVFFLWFP 537

Query: 511 AGLVLYWLVGNLVAITQQKIIYASLE 536
           AGLVLYWLV N+++I QQ  I   +E
Sbjct: 538 AGLVLYWLVNNILSIAQQWYITRKIE 563