Pairwise Alignments

Query, 672 a.a., PAS/PAC Sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 561 a.a., Sensory box histidine kinase/response regulator from Pseudomonas fluorescens FW300-N1B4

 Score =  257 bits (656), Expect = 1e-72
 Identities = 180/538 (33%), Positives = 270/538 (50%), Gaps = 50/538 (9%)

Query: 140 LGDSEERFRGTFDAAGHGMALIDTEGHFRMVNPMLRALLGIDAAHP-----GDLAAVVFP 194
           L     R++  F+ A HG+         R  NP L  +LG            DLA  +F 
Sbjct: 38  LETERNRYKWLFENAVHGIFQASLLEGMRAANPALARMLGYQNPQEVLFTLTDLAGTLFV 97

Query: 195 GDIKIAIDMIRRLAAEIEPSLTVRLRFVGADGATVWGLVSATLQRPRVGERAYVVMHLRD 254
           G  +  ++ I  +       L    +    DG+ +  L++  L+  + G    V   + D
Sbjct: 98  GGAQ-ELESIGEILQRERSLLGYETQLRRKDGSVLDVLMNLLLKPDQEG---LVEGFVAD 153

Query: 255 ITQEQLAEGRL-------------------------RAAKEEADRASRAKTRFLAAASHD 289
           IT+ +LA+ RL                         R A++ A+ A+R+K ++LAAASHD
Sbjct: 154 ITERKLAQQRLQQLNDELEQRVTARTNELLDAAEALRDARDAAEAANRSKDKYLAAASHD 213

Query: 290 LRQPLQALNMFISVLAGRENDPWRAAIIGKIEKTADALTALLDTLLDISKLDAGLMRCEP 349
           L QPL A  + IS L  R+       ++ +  +  +    LL  LLDIS+LD   ++ + 
Sbjct: 214 LLQPLNAARLLISTLRERKLPDVEQVLVERTHQALEGAEDLLTDLLDISRLDQAAVKPDI 273

Query: 350 RDVMIGGLLARLSEEFQPLAVSRGLALRAVASSAAVHADPALVEIVLRNFLGNALRYTPS 409
               +  L A L  EFQ +A + GL LR      A+H D  L+  VLRNFL NA RYT  
Sbjct: 274 ALYRLDELFAPLVSEFQSVAAAAGLNLRVHMGDYALHTDLRLMTRVLRNFLSNACRYTDE 333

Query: 410 GRVLVGARRRGDGVEIQVLDTGPGIAPEQHGLIFEDFHQVENPAREKGEGLGLGLAIVKR 469
           G +L+GARRRGD + I+V DTG GI  ++   IF +F+Q++       +G+GLGLAIV+R
Sbjct: 334 GCILLGARRRGDALRIEVWDTGRGIPADRLDSIFLEFNQLDVGRAADRKGVGLGLAIVER 393

Query: 470 VALLLGARVGVRSLPGRGSCFTI------RLPGPQGRAIERPEDGLLGVSAQAARGLTVL 523
           +A +L  R+ V S PGRGS F+I       +P P  +A  +P  G          G  +L
Sbjct: 394 IAKILDYRIQVHSRPGRGSMFSIEVPISHEIPLPISQAAPQPSTG------NPLPGRRLL 447

Query: 524 LIDDDPAVLDGLTLVLEAWDCEVLAFADLDGLREGLGSGGFLAAPDVILSDFRLGKGENG 583
           ++D++ ++L+ ++ +L  W CEV+   D       L       AP++IL+D+ L  G  G
Sbjct: 448 VLDNEVSILESMSALLGQWGCEVVIATDEATALVALQG----QAPELILADYHLDHGVVG 503

Query: 584 VEAVRLVRDHFAQAVPALLLTGDTAPQRLREADASGLPLLHKPVKPEVLRGALADVIA 641
            E VR +R+HF+QA+PA+++T D   Q  R       PLL+KPVKP  LR  L  ++A
Sbjct: 504 CEVVRHLREHFSQAIPAVIITADRTDQCRRSLQRLDAPLLNKPVKPGKLRAVLTQLLA 561