Pairwise Alignments

Query, 328 a.a., Phage integrase (NCBI) from Rhodospirillum rubrum S1H

Subject, 304 a.a., tyrosine recombinase XerD from Dechlorosoma suillum PS

 Score =  181 bits (459), Expect = 2e-50
 Identities = 128/314 (40%), Positives = 171/314 (54%), Gaps = 40/314 (12%)

Query: 23  EAFLEMMLAERGAARRTVEAYGRDLRDYAAFLREKGLDGLTVSRPTLRAYLATMAAAGLA 82
           E F+  +  + G A+ T+ AY  DL  +A +L+   +         +  YL  + +  + 
Sbjct: 10  EEFINTVWLQNGLAQNTLSAYRSDLVQFAKWLK---VPLSAAGEVEISNYLVHLYSQPIR 66

Query: 83  PR--SQARKLSCLRQFHGFLVSEGRRPDDPTIGLDSPRLGRPLPRVLSEAEVDALLVAAE 140
           P+  SQ R +S LR+F+G+L    R   +P + ++ P LG  LP+VL+ A+V+ALL A +
Sbjct: 67  PKPSSQRRLISVLRRFYGWLFEGHRIQKNPMLTMELPSLGVRLPKVLAMAQVEALLEAPD 126

Query: 141 AGEGARGLRARVLLELLYSTGLRVSELVSLPLSVANRDPETILVRGKGDKERLVPLGLPA 200
               A GLR R LLE+LY+TG RVSELV L L+  N D   +   GKG+KERLVPLG   
Sbjct: 127 TST-ALGLRDRALLEVLYATGFRVSELVGLTLTQLNLDMGVVRTIGKGNKERLVPLG--- 182

Query: 201 RAALRDWLI-----ARPTTLPASGAARRRADRFLFPSSAAEGHLTRDG------------ 243
                DWL+     +RP  L      + R+   LF +    GH  +D             
Sbjct: 183 -EISSDWLVRYLAESRPVLL------KGRSSDGLFIT----GHQKKDNNDARMTRQMAWL 231

Query: 244 FAKMLGELALRAGIDPARVSPHVLRHCFASHMLAHGADLRGVQTLLGHADIATTQIYTHV 303
             K  GEL    GI   R+SPHVLRH FA+H+L  GADLR VQ LLGHADI+TTQIYTHV
Sbjct: 232 LIKKYGELV---GIPRDRISPHVLRHAFATHLLNCGADLRIVQLLLGHADISTTQIYTHV 288

Query: 304 LDDRLTTLVRTAHP 317
             +RL  L    HP
Sbjct: 289 ARERLKELHAKHHP 302