Pairwise Alignments

Query, 241 a.a., Tripartite ATP-independent periplasmic transporter, DctQ component (NCBI) from Rhodospirillum rubrum S1H

Subject, 173 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 47.4 bits (111), Expect = 2e-10
 Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 28/168 (16%)

Query: 2   KVLDHLEEALIAFLMAAATLIIFVAVVHRYASGVAFLYPYVGHLHFAWAQELCIILFVWM 61
           K+++++EE +   LMAA   ++   +  R+      L          W++EL  +LF++M
Sbjct: 8   KIINNIEEIITVPLMAALLAVLTWQIGTRWLLNDPSL----------WSEELARLLFMYM 57

Query: 62  AKFGAAYGVRTGIHVGVDVVINRLKPRARGVFIVFGLLAGAAFTGCVAVLGGSFVWDNGA 121
              G A  ++   HV +    ++L  +AR   ++   +A     G + VLG    + +  
Sbjct: 58  CLVGCAIAIKRSSHVNITFFSDKLPEKARLSLVLSLEIAVLVSIGAIIVLG----YQHAQ 113

Query: 122 HYAFVTALGLEIGDLYEGPITADLEWPTWIVYSAIPLGSSLMCFRFLQ 169
             AF   + L I               +W+ YS +P+G   M FR L+
Sbjct: 114 RNAFFELITLGISS-------------SWMNYS-LPVGGVFMVFRQLE 147