Pairwise Alignments

Query, 455 a.a., tRNA modification GTPase TrmE (NCBI) from Rhodospirillum rubrum S1H

Subject, 453 a.a., tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE from Vibrio cholerae E7946 ATCC 55056

 Score =  278 bits (710), Expect = 3e-79
 Identities = 177/469 (37%), Positives = 255/469 (54%), Gaps = 30/469 (6%)

Query: 1   MTVDTIFAPATARGRAGVAIVRLSGPRAATALTLLAGRLPEARRATRAALRSPPSGPGPT 60
           MT DTI A ATA GR GV I+R+SGP AA     + GR    R A               
Sbjct: 1   MTTDTIVAQATAPGRGGVGIIRVSGPLAAHVAQTVTGRTLRPRYAEYL------------ 48

Query: 61  GPGPEEGGEVLDDALVLWFPAPASFTGEDVAELHIHGGRAVLAAVLGALGDLPGLRPAEA 120
            P  +E G+ LD  + L+FP P SFTGEDV EL  HGG  V+  ++  +  + G+RPA  
Sbjct: 49  -PFTDEDGQQLDQGIALFFPNPHSFTGEDVLELQGHGGPVVMDMLIRRILQIKGVRPARP 107

Query: 121 GEFSRRAFLNGRLDLTAAEALADLVDAETQAQRRQALRQADGALVRLYEGWRKTGIGLLA 180
           GEFS RAFLN ++DLT AEA+ADL+DA ++   + AL+   G   +      ++ I L  
Sbjct: 108 GEFSERAFLNDKMDLTQAEAIADLIDASSEQAAKSALQSLQGEFSKRIHTLVESLIHLRI 167

Query: 181 HLEAVLDFPDEDLPPEVETAVRGGIGALADALAGHLDDRHRGERLRDGLQVAVVGAPNVG 240
           ++EA +DFP+E++    +  V   +  + D LA    + ++G  +R+G++V + G PN G
Sbjct: 168 YVEAAIDFPEEEIDFLADGKVSADLQTIIDNLAAVRREANQGAIMREGMKVVIAGRPNAG 227

Query: 241 KSSLVNRLARREAAIVSDIAGTTRDIVEVALDLGGYPLVVADTAGLRETSDGIEAEGVRR 300
           KSSL+N L+ +E+AIV+DIAGTTRD++   + + G PL + DTAGLR+ SD +E  G+ R
Sbjct: 228 KSSLLNALSGKESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDAVEKIGIER 287

Query: 301 ARARLAAADLTLAVSDGTVENGAD---------DPAADLTGEAVLRVVTKRDLL-DPRAV 350
           A   +  AD  L + DGT     D         D   +  G  V+R   K D   +P  +
Sbjct: 288 AWEEIRQADRVLFMVDGTTTEATDPQDIWPDFVDKLPENIGITVIR--NKADQTGEPLGI 345

Query: 351 ERWLARGALPVSTLTGEGLDALEAALESRARAFFEGDGTPALTRQRHRSALMEARAAL-- 408
                   + +S  TG+G+DAL   L+     F        + R+RH  AL  A   L  
Sbjct: 346 CHVNQPTLIRLSAKTGQGVDALRQHLK-ECMGFSGNQEGGFMARRRHLDALERAAEHLAI 404

Query: 409 -RRAAEAPLA-ELVAEDLRLALRAIGRITGRVTVDDVLDVIFRDFCIGK 455
            ++  E  +A E++AE+LR+A + +  ITG  + DD+L  IF  FCIGK
Sbjct: 405 GQQQLEGYMAGEILAEELRIAQQHLNEITGEFSSDDLLGRIFSSFCIGK 453