Pairwise Alignments

Query, 418 a.a., transcription termination factor Rho (NCBI) from Rhodospirillum rubrum S1H

Subject, 439 a.a., flagellum-specific ATP synthase FliI from Vibrio cholerae E7946 ATCC 55056

 Score = 72.8 bits (177), Expect = 2e-17
 Identities = 71/273 (26%), Positives = 122/273 (44%), Gaps = 23/273 (8%)

Query: 134 DNLTPLYPDERLKLE---IDDPTRKEFTT------RIIDLITPLGKGQRALIVAPPRTGK 184
           D L P+Y D+R  L    I+   RK          + I+ +  +GKGQR  + A    GK
Sbjct: 113 DGLGPIYTDQRASLNAIPINPLARKPINEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGK 172

Query: 185 TVMLQNVAHAISANNPEVYLIVLLIDERPEEVTDMARSVNGE-------VVSSTFDEPAS 237
           +V L  +    +A      ++V LI ER  EV +    + G        VV++  D    
Sbjct: 173 SVTLGMMTRGTTAQ----VVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADSSPL 228

Query: 238 RHVQVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKV-LTGGVDANALQR 296
             ++  +  +  A+   +   DV++L+DS+TR A+A   +  S G+   T G   +   +
Sbjct: 229 MRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAK 288

Query: 297 -PKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIILDRKLADRRVF 355
            P     A       GS+T   T L + G  + + I +  +   +  I+L R++AD   +
Sbjct: 289 LPALVERAGNGGPHQGSITAFFTVLTE-GDDLQDPIADASRAILDGHIVLSREMADAGHY 347

Query: 356 PSIDIARSGTRKEELLVRKDVLSKMWVLRRILS 388
           P+ID+ +S +R    +   + L     +R+ILS
Sbjct: 348 PAIDVEKSVSRVMPQITTDEHLLMSKAVRQILS 380