Pairwise Alignments

Query, 252 a.a., Histidine biosynthesis protein HisF (NCBI) from Rhodospirillum rubrum S1H

Subject, 241 a.a., 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase from Methanococcus maripaludis S2

 Score =  108 bits (271), Expect = 8e-29
 Identities = 65/227 (28%), Positives = 124/227 (54%), Gaps = 8/227 (3%)

Query: 6   IIPCLDVKDGRVVKGVNFVGLR---DAGDPVEQARLYDAAGADELCFLDITASHENRDTL 62
           +IP +D+K+ + V+ +     +   +  +P E A+ +   GA+ L  +D+  + + +   
Sbjct: 3   VIPAVDMKNKKCVQLIQGNPDKKHVELDNPPEIAKKWVNEGAEMLHLVDLDGALDGKRVN 62

Query: 63  LDVVGRTADQCFMPLTVGGGVRTTEDIRKLLLAGADKVSINTAAVTRPEFVREAAETFGA 122
            + +     +  +P+ +GGG+R+ ED   L+  GA KV I T AV  PE ++E ++  G+
Sbjct: 63  DEFIEEIIKKSGVPVQIGGGIRSIEDAEYLVEKGAKKVIIGTIAVENPEIIKELSKRIGS 122

Query: 123 QCVVVALDAKSVGPGRFEIFTHGGRKATGLDAVDWAKRMVALGAGEILLTSMDRDGTRQG 182
           + ++V+LDAK       ++   G ++ T    V   K +  +GAG IL T++D +G   G
Sbjct: 123 EKIMVSLDAKD-----GKVVIKGWKEKTKYTPVQIGKILEEMGAGSILFTNVDSEGLLNG 177

Query: 183 FNLPLTRAIADAVAVPVIASGGVGTLDHLVEGVRDGHATAVLAASIF 229
            N+  T+ + D + +P++ASGGV T+D L++    G    V+ ++I+
Sbjct: 178 INIEPTKELVDNLKIPIVASGGVTTIDDLLKLKEIGVYGVVVGSAIY 224



 Score = 38.9 bits (89), Expect = 1e-07
 Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 2/114 (1%)

Query: 5   RIIPCLDVKDGRVVKGVNFVGLRDAGDPVEQARLYDAAGADELCFLDITASHENRDTLLD 64
           +I+  LD KDG+VV  +     +    PV+  ++ +  GA  + F ++ +        ++
Sbjct: 124 KIMVSLDAKDGKVV--IKGWKEKTKYTPVQIGKILEEMGAGSILFTNVDSEGLLNGINIE 181

Query: 65  VVGRTADQCFMPLTVGGGVRTTEDIRKLLLAGADKVSINTAAVTRPEFVREAAE 118
                 D   +P+   GGV T +D+ KL   G   V + +A       +++A E
Sbjct: 182 PTKELVDNLKIPIVASGGVTTIDDLLKLKEIGVYGVVVGSAIYKNMINLKDAIE 235