Pairwise Alignments

Query, 1041 a.a., Periplasmic Sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

 Score =  214 bits (546), Expect = 2e-59
 Identities = 143/400 (35%), Positives = 213/400 (53%), Gaps = 27/400 (6%)

Query: 494 ARDAAQAAARAKAEFLATMSHEIRTPMNAVIGMTGLLLDGPLEPRQIDYARTIQRSGEHL 553
           AR  A+ +AR +AEFLA MSHE+RTP+N V+G++ LL   PL   Q ++   +  SGEHL
Sbjct: 469 ARREAEESARVRAEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGEHL 528

Query: 554 LGLINDILDFSRIDTGRLVLVDRDFSLSHEVQAVVSLCGVAASAKRLSVRIDLDRALAPG 613
           L ++NDILDFSR++ G+  +   +F L   V A+  +     + K L + ++ +   A  
Sbjct: 529 LAVLNDILDFSRLEQGKFRIQKNEFRLKELVCAIDRIYRPLCNEKGLELVVNSNITTAAI 588

Query: 614 YRGDSQRLRQILVNLVGNAVKFTDKGMVTVQGDVLKIEND-IHWLRLRVVDTGCGIPRER 672
            R D  R+ QIL NL+ NA+KFT +G + V  ++  IE D +  L ++VVDTG GI  + 
Sbjct: 589 VRSDQIRINQILFNLLNNAIKFTHQGSIRV--ELQLIEGDPLAQLVIQVVDTGIGIREQD 646

Query: 673 FNDLFAAFQQLDGSATRTHGGTGLGLAISRKLARLMGGDITVSSTPGEGSVFSVVVPMVP 732
              +F  F Q + + TR +GG+GLGL I   L  ++ G + VSS  G G+ F + +P+  
Sbjct: 647 LTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLPIEL 706

Query: 733 LSRTPAPDGTLGDGDAERGEEPPAADVPTEAAASRALVVLVAEDILENQILVQAVLEKQG 792
           + +  AP   L           PA D   +    + L VL+ ED   N  + QA   K G
Sbjct: 707 VEKPDAPQQLL-----------PAPD--PQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYG 753

Query: 793 HRVILAANGREALAKLRGADPVDVVLMDIQMPVMDGLDACRAIRGLPPEVHFSDGRPIAG 852
             V    +G +A+ +L+  D  D+VLMD Q+P +DG++  R I+ +   +H         
Sbjct: 754 LDVSWVTDGLQAIEELKIHD-YDLVLMDNQLPYLDGVETTRTIKKV---LHLP------- 802

Query: 853 VPIIAFTADALPGDRERFLSAGMNEHLAKPLNARRLRALL 892
           V + A TAD L   R+ F  AG    L KPL  + L   L
Sbjct: 803 VVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKAL 842