Pairwise Alignments

Query, 1041 a.a., Periplasmic Sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  231 bits (589), Expect = 3e-64
 Identities = 148/401 (36%), Positives = 223/401 (55%), Gaps = 35/401 (8%)

Query: 453 QTAPAFDVRELDETG--REV----AAMGDRLGRAN---------EELIANREELVRARDA 497
           Q++  ++V  +D TG  RE+    A+  DR  + N          E     +EL +A++A
Sbjct: 540 QSSQNYEVSLVDYTGVQREMLVYEASFSDRADKVNGIVGILLDMTERKEMEDELRKAKEA 599

Query: 498 AQAAARAKAEFLATMSHEIRTPMNAVIGMTGLLLDGPLEPRQIDYARTIQRSGEHLLGLI 557
           A A ++AK +FLA MSHEIRTPMNA++GM  L L+ PL+  Q  Y   I  S ++LLG+I
Sbjct: 600 ADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTTQRKYVTRINESAKNLLGII 659

Query: 558 NDILDFSRIDTGRLVLVDRDFSLSHEVQAVVSLCGVAASAKRLSVRIDLDRALAPGYRGD 617
           NDILDFS+++ G+L +   DF+L   +  V ++  + A  K +   +D+D  +  G  GD
Sbjct: 660 NDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDPHIPLGLIGD 719

Query: 618 SQRLRQILVNLVGNAVKFTDKGMVTVQGDVLKIENDIHWLRLRVVDTGCGIPRERFNDLF 677
             RL Q++VNL GNAVKFT +G + +   V ++      LR  V DTG GI +++ +DLF
Sbjct: 720 PLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQQVTLRFAVKDTGIGIAQDKLDDLF 779

Query: 678 AAFQQLDGSATRTHGGTGLGLAISRKLARLMGGDITVSSTPGEGSVFSVVVPMVPLSRTP 737
            AF Q D S TR +GGTGLGL+IS++L  LMGG ITV S  G+GS F   V         
Sbjct: 780 DAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEEGKGSTFEFSV--------- 830

Query: 738 APDGTLGDGDAERGEEPPAADVPTEAAASRALVVLVAEDILENQILVQAVLEKQGHRVIL 797
                 G  DA+  +       P    A +   VLV +D    + ++ ++L      V+ 
Sbjct: 831 ----VCGLQDAKMRD----ISQPVHGLADKR--VLVVDDNDSARHILDSLLTAMRFNVVT 880

Query: 798 AANGREALAKLRGADPVDVVLMDIQMPVMDGLDACRAIRGL 838
            +NG EAL++++   P D++ +D  MP M+G++    ++ L
Sbjct: 881 VSNGFEALSEIQ-QKPFDMLFVDWNMPGMNGIELLTRVKTL 920



 Score = 95.5 bits (236), Expect = 2e-23
 Identities = 81/241 (33%), Positives = 119/241 (49%), Gaps = 27/241 (11%)

Query: 771  VLVAEDILENQILVQAVLEKQGHRVILAANGREALAKLRGADPVDVVLMDIQMPVMDGLD 830
            +L+ ED   NQ +   +L+  G  V++A +G+EAL +L  AD  D+VLMD+QMPVMDG+ 
Sbjct: 994  LLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHAD-FDLVLMDMQMPVMDGIT 1052

Query: 831  ACRAIRGLPPEVHFSDGRPIAGVPIIAFTADALPGDRERFLSAGMNEHLAKPLNARRLRA 890
            A   IR   P  H         +PI+A TA+A+  D ER L AGMN+HL+KP+   +   
Sbjct: 1053 ATEHIRA-NPRWH--------SLPIVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFYQ 1103

Query: 891  LLGDIAAGRPLTPRSSAAPS-PRKSLEAPRRLLD-PEA----LAQLRTSLGEDYPIYLRA 944
            +L            SS +P+ P  S  A   LLD P+     L Q    +G +   Y   
Sbjct: 1104 VLRHFLQVSDEQSFSSHSPNKPSASKPAMNALLDLPQLTGVDLEQAIFRIGGNQQRYF-- 1161

Query: 945  AEEALRH-------RARALPEALARGAFEEASQLLHGLRGTLAAFGMEAEATLCQRLRGD 997
              E LRH          ++   +    +  A+++ H L+G+ A  G+EA A L   +   
Sbjct: 1162 --EILRHFIDSQVDELNSVTGLIEAQDWSSATRVAHTLKGSAANLGLEALAQLAAEMEQS 1219

Query: 998  L 998
            L
Sbjct: 1220 L 1220