Pairwise Alignments

Query, 1041 a.a., Periplasmic Sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 858 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  247 bits (630), Expect = 3e-69
 Identities = 165/429 (38%), Positives = 228/429 (53%), Gaps = 26/429 (6%)

Query: 486 ANREELVRARDAAQAAARAKAEFLATMSHEIRTPMNAVIGMTGLLLDGPLEPRQIDYART 545
           A   EL  AR+ A+AA RAK+EFLA MSHEIRTP   ++G+  LLL  PL  +Q  Y R 
Sbjct: 335 AAESELRHAREKAEAANRAKSEFLANMSHEIRTPFTGILGVLDLLLHTPLNEKQERYIRL 394

Query: 546 IQRSGEHLLGLINDILDFSRIDTGRLVLVDRDFSLSHEVQAVVSLCGVAASAKRLSVRID 605
              S + LL ++NDILD S+I+ G+LV+   +  L   +  +  +   AA+ K L  R  
Sbjct: 395 AYGSTKQLLAILNDILDISKIEAGKLVIHPEEVDLVLLLGELTEVQAAAAAQKGLEFRYH 454

Query: 606 LDRALAPGYRGDSQRLRQILVNLVGNAVKFTDKGMVTVQGDVLKIENDIHWLRLRVVDTG 665
           +   + P   GD  RLRQI+ NL+ NA+KFT+ G V +  +  +I      LR+ V D+G
Sbjct: 455 IKGIIPPKIHGDPVRLRQIMANLLNNAIKFTNSGWVELDIECTRIAPGRQHLRVEVRDSG 514

Query: 666 CGIPRERFNDLFAAFQQLDGSATRTHGGTGLGLAISRKLARLMGGDITVSSTPGEGSVFS 725
            G+P E    +F  F Q D S TR  GGTGLGL I ++L  LM G I VSS  GEGS F 
Sbjct: 515 IGVPPELQETIFDKFTQADSSTTRLFGGTGLGLTICKQLVELMHGSIGVSSNSGEGSCFW 574

Query: 726 VVVPMVPLSRTPAPDGTLGDGDAERGEEPPAADVPTEAAASRALVVLVAEDILENQILVQ 785
             + +     T +P   L  G        P   +P +        +L+ +D   N+ ++ 
Sbjct: 575 FDIELPESDPTVSPVPVLPAGS-------PITALPRDTR------ILLVDDTEANREVLA 621

Query: 786 AVLEKQGHRVILAANGREALAKLRGADPVDVVLMDIQMPVMDGLDACRAIRGLPPEVHFS 845
             L +   +V  AANG EA+       P D +LMD QM  MDG +A R IR         
Sbjct: 622 EYLAQAHCQVRQAANGLEAVTLAESWQP-DAILMDCQMAGMDGYEATRQIR-------IQ 673

Query: 846 DGRPIAGVPIIAFTADALPGDRERFLSAGMNEHLAKPLNARRLRALLGDIAAGRPLTPRS 905
           +G+     PIIA TA  + GDRE+ L+AGM+++L KP++A+ L A +G    GR   P  
Sbjct: 674 EGQR-RRTPIIALTAFVMRGDREKCLAAGMDDYLPKPVDAQTLIATIGKWLEGRETNP-- 730

Query: 906 SAAPSPRKS 914
             A +PR S
Sbjct: 731 --ARTPRFS 737



 Score = 53.9 bits (128), Expect = 5e-11
 Identities = 46/122 (37%), Positives = 61/122 (50%), Gaps = 10/122 (8%)

Query: 771 VLVAEDILENQILVQAVLEKQGHRVILAANGREALAKLRGADPVDVVLMDIQMPVMDGLD 830
           +L+ +D  E +     +LE  G +V  A++G EAL     AD  D+VLMD +MP +DG  
Sbjct: 740 ILLVDDNPEIREASTCLLEALGCQVQSASSGEEALQLGPEAD-FDLVLMDCRMPGLDGCA 798

Query: 831 ACRAIRGLPPEVHFSDGRPIAGVPIIAFTADALPGDRERFLSAGMNEHLAKPLNARRLRA 890
             RA R          G P A   IIA TA      R +   AGMN+ LAKP + + L  
Sbjct: 799 TTRAWRAR------ERGTPTA---IIALTAGDPDESRAQCREAGMNDFLAKPFSEQELVT 849

Query: 891 LL 892
           LL
Sbjct: 850 LL 851