Pairwise Alignments

Query, 1041 a.a., Periplasmic Sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 1000 a.a., sensory box histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  263 bits (673), Expect = 4e-74
 Identities = 167/404 (41%), Positives = 230/404 (56%), Gaps = 22/404 (5%)

Query: 491 LVRARDAAQAAARAKAEFLATMSHEIRTPMNAVIGMTGLLLDGPLEPRQIDYARTIQRSG 550
           L R++ AA++A  AK EFLA MSHEIRTP+N ++GM  LL+  PL+  Q  Y      S 
Sbjct: 597 LQRSKKAAESANAAKTEFLANMSHEIRTPLNGIMGMMQLLVSTPLDDEQKQYVSNAISSS 656

Query: 551 EHLLGLINDILDFSRIDTGRLVLVDRDFSLSHEVQAVVSLCGVAASAKRLSVRIDLDRAL 610
             L  L++D+LD SRI+ G LVL D   + S  + A+  L  +   + ++ + +++   L
Sbjct: 657 GRLSQLLSDVLDLSRIEAGGLVLRDECVTPSELLDAIKDLFTLGTRSSQVELALEISPGL 716

Query: 611 APGYRGDSQRLRQILVNLVGNAVKFTDKGMVTVQGDVLKIENDIHWLRL-RVVDTGCGIP 669
                 D  RLRQIL NLVGNA+KFT+KG + V+ D L I   +  L L  V DTG GIP
Sbjct: 717 PQHILLDGGRLRQILFNLVGNALKFTEKGHIHVRLDELAIHGGMRQLLLISVEDTGIGIP 776

Query: 670 RERFNDLFAAFQQLDGSATRTHGGTGLGLAISRKLARLMGGDITVSSTPGEGSVFSVVVP 729
           +    D+F  F Q+DGS  R  GG GLGL+I R+L   MGG + + S  GEG+   + +P
Sbjct: 777 QGAMRDIFNPFYQVDGSHVRRQGGVGLGLSIVRRLVIAMGGALCIDSAEGEGTRIHLSLP 836

Query: 730 MVPLSRTPAPDGTLGDGDAERGEEPPAADVPT---EAAASRALVVLVAEDILENQILVQA 786
                RT APD   GD     GE P A  +P    + AA   L +L+ ED   NQ+    
Sbjct: 837 F----RTCAPDS--GDKPETSGETPEAG-LPMALGDPAALHGLNLLLVEDDPVNQLATAG 889

Query: 787 VLEKQGHRVILAANGREALAKLRGADPVDVVLMDIQMPVMDGLDACRAIRGLPPEVHFSD 846
           +L K G RV +AANG+E LA    +D  D ++MD+QMP+MDG++A + +R        SD
Sbjct: 890 LLRKSGARVTIAANGQEGLAAAL-SDSFDCIIMDVQMPIMDGIEATQRLR--------SD 940

Query: 847 GR--PIAGVPIIAFTADALPGDRERFLSAGMNEHLAKPLNARRL 888
           GR    A  P++A TA AL GDRE  L++GM+ ++ KP     L
Sbjct: 941 GRYTARAATPVVAMTAHALEGDREMCLASGMDTYVTKPATLESL 984