Pairwise Alignments

Query, 404 a.a., succinyl-diaminopimelate desuccinylase (NCBI) from Rhodospirillum rubrum S1H

Subject, 397 a.a., succinyl-diaminopimelate desuccinylase from Sinorhizobium meliloti 1021

 Score =  409 bits (1052), Expect = e-119
 Identities = 219/397 (55%), Positives = 269/397 (67%), Gaps = 20/397 (5%)

Query: 15  DPLALARALVACPSVTPRDAGALDVLESALIALGFRCVRLPFGAEGGERVDNLYARRGGA 74
           DP++   AL+ CPSVTP + GAL  LE+ L  +GF+  R+     G   ++NLYAR GG 
Sbjct: 5   DPVSNLAALIRCPSVTPAEGGALAALEAMLAPVGFKVDRVVAKEPGTPDIENLYARTGGE 64

Query: 75  GPCFGFAGHTDVVPAGD--GWSRPPFGAEVVDGALVGRGAADMKGGIACFVAAVARLISG 132
           GP   FAGHTDVVP GD   WSRPPF A + +G + GRGA DMKGGIACFVAAVAR    
Sbjct: 65  GPHLMFAGHTDVVPVGDEAAWSRPPFSAAIAEGEMYGRGAVDMKGGIACFVAAVAR---- 120

Query: 133 PDSTGSISRHD-PTGSIALLITGDEEGPALHGTRKVLEWMEGAGERMDLCLVGEPTNPEG 191
                 I +H  P GSI+ LITGDEEGPA++GT K+LEW    GER D CLVGEPTNP+ 
Sbjct: 121 -----HIEKHGAPKGSISFLITGDEEGPAINGTVKLLEWAAARGERWDACLVGEPTNPDC 175

Query: 192 LGDMIKIGRRGSLTATVTLLGRAGHVAYPHLADNPLHRLSTLTGLLLAETLDDGTAHFQP 251
           +GDMIKIGRRGSL+  +T+ G  GH AYPHLADNP+  +  +   L+    DDGT +FQP
Sbjct: 176 IGDMIKIGRRGSLSGRITVHGVQGHAAYPHLADNPVRSILQIAQALMDPPFDDGTENFQP 235

Query: 252 SSLQLTSIDVGNPAANVIPAKATLRFNIRFNDRHSGESLSAWIRARCLAACDGD------ 305
           S+L++T+IDVGN A NVIPAKA+  FNIRFNDR + ESL A I AR   A  G       
Sbjct: 236 SNLEVTTIDVGNTAVNVIPAKASAAFNIRFNDRWTAESLMAEIVARLDRAAAGSALRPGR 295

Query: 306 -ESGFSLVL-EHSGDAFLTPPGPLSDLIATACQAVTGRRPELSTSGGTSDARFIRSHCPV 363
             + + +V  E     FLT    L D ++ A +AVTGR+P+LST+GGTSDARFI+ +CPV
Sbjct: 296 APARYEIVWNERPSHVFLTRNNALIDSLSGAVEAVTGRQPQLSTTGGTSDARFIKDYCPV 355

Query: 364 AEFGLVGRTMHKPDERVAVADLEALSEIYRRVLVGFF 400
            EFGLVG+TMH  DERVA+ADLE L+ IY   +  +F
Sbjct: 356 VEFGLVGKTMHMVDERVALADLETLTGIYETFIARWF 392