Pairwise Alignments

Query, 404 a.a., succinyl-diaminopimelate desuccinylase (NCBI) from Rhodospirillum rubrum S1H

Subject, 432 a.a., ArgE/DapE family deacylase from Rhodopseudomonas palustris CGA009

 Score = 70.5 bits (171), Expect = 9e-17
 Identities = 88/348 (25%), Positives = 137/348 (39%), Gaps = 67/348 (19%)

Query: 73  GAGPCFGFAGHTDVVPAG--DGWSRPPFGAEVVDGALVGRGAADMKGGIACFVAAVARLI 130
           G G      GH DVVP G  D WS PP+ A+V DG ++GRGA DMKGG++  + A+  + 
Sbjct: 100 GKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAI- 158

Query: 131 SGPDSTGSISRHDPTGSIALLITGDEEGPALHGTRKVLEWMEGAGERMDLCLVGEPTNPE 190
                    + + P   + +    +EE    +G    L      G R D CL+ EPT   
Sbjct: 159 -------RTAGYAPDARVHVQTVTEEESTG-NGALSTLM----RGYRADACLIPEPT--- 203

Query: 191 GLGDMIKIGRRGSLTATVTLLGRAGHVAYPHLADNPLHRLSTLTGLLLAETLDDGTAHFQ 250
             G  +   + G++   + + G   HVAY     + +     L+ + L    ++ T    
Sbjct: 204 --GHTLTRAQVGAVWFRLRVRGTPVHVAYSETGTSAI-----LSAMHLIRAFEEYTK--- 253

Query: 251 PSSLQLTSIDVGNPAANVIPAKATLRFNIR-FNDRHSGESLSAWIR-------------- 295
               +L +  V +P    +  K  ++FN+          S +AW                
Sbjct: 254 ----ELNAQAVRDPWFGQV--KNPIKFNVGIIKGGDWASSTAAWCELDCRLGLLTGDTPQ 307

Query: 296 ------ARCLAACDGDESGFS---LVLEHSG----DAFLTPPGPLSDLIATACQAVTGRR 342
                  +CLA     +S  S     L  SG     A   P G   D++  A +A     
Sbjct: 308 EAMRGIEKCLADAQATDSFLSENPAELVWSGFQADPAVCEPGGVAEDVLTAAHKAAFNAP 367

Query: 343 PELSTSGGTSDARF--IRSHCPVAEFGLVGRTMHKPDERVAVADLEAL 388
            +   S   +D R+  +    P   +G  G+  H  DER+   DLE+L
Sbjct: 368 LDARLSTAVNDTRYYSVDYGIPALCYGPYGQGPHAFDERI---DLESL 412