Pairwise Alignments

Query, 404 a.a., succinyl-diaminopimelate desuccinylase (NCBI) from Rhodospirillum rubrum S1H

Subject, 384 a.a., acetylornithine deacetylase ArgE from Phaeobacter inhibens DSM 17395

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 84/280 (30%), Positives = 122/280 (43%), Gaps = 36/280 (12%)

Query: 60  GGERVDNLYARRG-GAGPCFGFAGHTDVVPAGD-GWSRPPFGAEVVDGALVGRGAADMKG 117
           GG++  NL+A  G         +GH+DVVP  D  W+  PF  E  DG L GRG  DMKG
Sbjct: 48  GGQKA-NLFATLGPDTDGGIVLSGHSDVVPVTDQDWTSDPFTMEEWDGRLYGRGTCDMKG 106

Query: 118 GIACFVAAVARLISGPDSTGSISRHDPTGSIALLITGDEEGPALHGTRKVLEWMEGAGER 177
            IA      A L   P     ISR      I    T DEE   + G   +++ +   G +
Sbjct: 107 FIA------ATLAMAPKFAEQISRR----PIHFAFTYDEEVGCI-GAGHLVQALRERGLK 155

Query: 178 MDLCLVGEPTNPEGLGDMIKIGRRGSLTATVTLLGRAGHVAYPHLADNPLH-------RL 230
             L L+GEPT+       +  G +G    +    G  GH + P    N +        RL
Sbjct: 156 PRLALIGEPTSMR-----VVEGHKGCHEYSTRFQGLEGHGSNPGRGVNAVEYAARYVSRL 210

Query: 231 STLTGLLLAETLDDGTAHFQP--SSLQLTSIDVGNPAANVIPAKATLRFNIR----FNDR 284
             L G L   T  D  + F P  ++L + +++ G  A NVI +KA + + +R     +  
Sbjct: 211 LDLRGDLQQRTPPD--SRFDPPWTTLNIGALN-GGSAHNVIASKAQVDWEMRPVQPSDAD 267

Query: 285 HSGESLSAWIRARCLAACDGDESGFSLVLEHSGD-AFLTP 323
           H  ++++ + R   L A        S+  E  G+ A LTP
Sbjct: 268 HVKDTMARYCRDTLLPAMQAIYPEASIETEVVGEVAGLTP 307