Pairwise Alignments

Query, 404 a.a., succinyl-diaminopimelate desuccinylase (NCBI) from Rhodospirillum rubrum S1H

Subject, 381 a.a., succinyl-diaminopimelate desuccinylase (RefSeq) from Shewanella sp. ANA-3

 Score =  277 bits (708), Expect = 4e-79
 Identities = 161/381 (42%), Positives = 218/381 (57%), Gaps = 20/381 (5%)

Query: 19  LARALVACPSVTPRDAGALDVLESALIALGFRCVRLPFGAEGGERVDNLYARRGGAGPCF 78
           L + L+A PSVTP D G   ++   L A+GF    + F     E   N++ARRG  GP F
Sbjct: 13  LTKELIARPSVTPLDEGCQTLMAERLAAIGFNIEPMVF-----EDTTNMWARRGNEGPVF 67

Query: 79  GFAGHTDVVPAGD--GWSRPPFGAEVVDGALVGRGAADMKGGIACFVAAVARLISGPDST 136
            FAGHTDVVPAGD   W  PPF   ++DG L GRGAADMKG +A  + A  R ++     
Sbjct: 68  CFAGHTDVVPAGDLSRWHTPPFEPTIIDGYLYGRGAADMKGSLAAMIVATERFVA----- 122

Query: 137 GSISRHDPTGSIALLITGDEEGPALHGTRKVLEWMEGAGERMDLCLVGEPTNPEGLGDMI 196
                 +  GSIA LIT DEEGP ++GT +V++ +E   E++   LVGEP++   LGD++
Sbjct: 123 ---KHPNHPGSIAFLITSDEEGPFINGTTRVIDTLEARNEKITWTLVGEPSSTLKLGDVV 179

Query: 197 KIGRRGSLTATVTLLGRAGHVAYPHLADNPLHRLSTLTGLLLAETLDDGTAHFQPSSLQL 256
           K GRRGSLTA +T+ G  GHVAYPHLADNP+H+ +     L     D+G   F P+S+Q+
Sbjct: 180 KNGRRGSLTANLTVKGIQGHVAYPHLADNPIHKAAPFLAELSQTHWDNGNEFFPPTSMQI 239

Query: 257 TSIDVGNPAANVIPAKATLRFNIRFNDRHSGESLSAWIRARCLAACDGDESGFSLVLEHS 316
            +I+ G  A+NVIP    + FN R++   + E L   + A   A     E  + +    +
Sbjct: 240 ANINGGTGASNVIPGTLEVMFNFRYSTEVTAEILIERVEALLTA----HELDYDISWTFN 295

Query: 317 GDAFLTPPGPLSDLIATACQAVTGRRPELSTSGGTSDARFIR-SHCPVAEFGLVGRTMHK 375
           G  FLT  GPL D    A + +TG   +  T+GGTSD RFI  +   V E G V  T+HK
Sbjct: 296 GLPFLTGEGPLLDATRHAIRQITGYDTDPQTTGGTSDGRFIAPTGAKVLELGPVNATIHK 355

Query: 376 PDERVAVADLEALSEIYRRVL 396
            +E V + DLE L+  Y  +L
Sbjct: 356 VNECVKIDDLEQLALCYEVIL 376