Pairwise Alignments

Query, 585 a.a., Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI) from Rhodospirillum rubrum S1H

Subject, 882 a.a., diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq) from Shewanella loihica PV-4

 Score = 94.0 bits (232), Expect = 2e-23
 Identities = 69/174 (39%), Positives = 91/174 (52%), Gaps = 18/174 (10%)

Query: 403 DGLTGLLNRRAFFDDMDRRLKGPPGLVERRAGEEAARRSERPARSALLYIDLDNFKWVND 462
           D LTGL NR  F + + + +K     V R A +          R ALL+IDLD FK +ND
Sbjct: 453 DTLTGLPNRAMFMERLAQAVKH----VRRHARD----------RFALLFIDLDRFKLIND 498

Query: 463 AHGHLRGDEALMTVRKILTDHTRATDIVARLGGDEFAIWLEGADAEAASAKAAE-ILAED 521
             GHL+GD  L+   + L    R+ D + R+GGDEF I L+  +  + + + AE IL E 
Sbjct: 499 TLGHLQGDRFLIETARRLNLCIRSNDTLGRIGGDEFVILLDSINTNSDAIEVAERILGE- 557

Query: 522 ALLRPFDGSPDRPLS-LSIGLAIHDPASGEGVEDLTARADMAMYAAKHGGKGRF 574
            L  P+  S     S  SIG+A    +SG+  E L   AD AMY AK  GKG F
Sbjct: 558 -LSEPYQLSNQSFTSGASIGIAFSGHSSGDTSESLLKDADAAMYQAKSNGKGCF 610